myRT

myRT report for GCA_007990365.1_ASM799036v1

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Seq: AP019831.1 Leptotrichia trevisanii JMUB3870 DNA, complete genome (2829322 bp)
Overview 1 RT 1: 263508-274139 bp 2 RT 2: 401532-408306 bp 3 RT 3: 859946-873029 bp 4 RT 4: 1422476-1433293 bp Neighborhood of RT #1 [263508, 274139] PRK07726 AdoMet_MTases COG4646 HELICc RVT_N RVT-GII RVT-GII GIIM GIIM Neighborhood of RT #2 [401532, 408306] TPR TPR TPR_8 TPR guaA RVT-UG7 Neighborhood of RT #3 [859946, 873029] COG2865 PHA03411 COG4646 COG4646 Helicase_C RVT_N RVT-GII GIIM Neighborhood of RT #4 [1422476, 1433293] PRK07726 PHA03411 COG4646 Helicase_C RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 263508-265580 bp Ori: BBM44161.1 Feature: domain Description: PRK07726 Location: 263514-265386 bp Feature: domain Description: PRK07726 Location: 26351 4-265386 bp Feature: gene Location: 265610-271201 bp Ori: BBM44162.1 Feature: domain Description: AdoMet_MTases Location: 267569-267923 bp Feature: domain Description: AdoMet_MTases Location: 267569-267923 bp Feature: domain Description: COG4646 Location: 268118-270704 bp Feature: domain Description: COG4646 Location: 2681 1 8-270704 bp Feature: domain Description: HELICc Location: 270752-271121 bp Feature: domain Description: HELICc Location: 270752-271 1 21 bp Feature: gene Location: 271749-272213 bp Ori: BBM44163.1 Feature: domain Description: RVT_N Location: 271794-272037 bp Feature: domain Description: RVT_N Location: 271 794-272037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272082-272178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272082-2721 78 bp Feature: gene Location: 272158-272922 bp Ori: BBM44164.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272176-272731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2721 76-272731 bp Feature: domain Description: GIIM Note: maturase Location: 272791-272899 bp Feature: domain Description: GIIM Note: maturase Location: 272791 -272899 bp Feature: gene Location: 272900-273220 bp Ori: BBM44165.1 Feature: domain Description: GIIM Note: maturase Location: 272909-273017 bp Feature: domain Description: GIIM Note: maturase Location: 272909-27301 7 bp Feature: gene Location: 273354-274139 bp Feature: gene Location: 401532-402572 bp Ori: BBM44289.1 Feature: domain Description: TPR Location: 401592-401757 bp Feature: domain Description: TPR Location: 401 592-401 757 bp Feature: domain Description: TPR Location: 401790-402045 bp Feature: domain Description: TPR Location: 401 790-402045 bp Feature: domain Description: TPR_8 Location: 402060-402135 bp Feature: domain Description: TPR_8 Location: 402060-4021 35 bp Feature: domain Description: TPR Location: 402240-402459 bp Feature: domain Description: TPR Location: 402240-402459 bp Feature: gene Location: 403087-404631 bp Ori: BBM44290.1 Feature: domain Description: guaA Location: 403093-404629 bp Feature: domain Description: guaA Location: 403093-404629 bp Feature: gene Location: 404811-406388 bp Ori: BBM44291.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 405228-405645 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 405228-405645 bp Feature: gene Location: 406439-407095 bp Feature: gene Location: 407896-408306 bp Feature: gene Location: 859946-861364 bp Ori: BBM44721.1 Feature: domain Description: COG2865 Location: 859949-861359 bp Feature: domain Description: COG2865 Location: 859949-861 359 bp Feature: gene Location: 861538-868890 bp Ori: BBM44722.1 Feature: domain Description: PHA03411 Location: 865051-865369 bp Feature: domain Description: PHA0341 1 Location: 865051 -865369 bp Feature: domain Description: COG4646 Location: 865684-866416 bp Feature: domain Description: COG4646 Location: 865684-86641 6 bp Feature: domain Description: COG4646 Location: 866686-868396 bp Feature: domain Description: COG4646 Location: 866686-868396 bp Feature: domain Description: Helicase_C Location: 868585-868804 bp Feature: domain Description: Helicase_C Location: 868585-868804 bp Feature: gene Location: 869442-870911 bp Ori: BBM44723.1 Feature: domain Description: RVT_N Location: 869487-869730 bp Feature: domain Description: RVT_N Location: 869487-869730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869775-870423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869775-870423 bp Feature: domain Description: GIIM Note: maturase Location: 870477-870708 bp Feature: domain Description: GIIM Note: maturase Location: 870477-870708 bp Feature: gene Location: 871045-872394 bp Feature: gene Location: 872436-873029 bp Feature: gene Location: 1422476-1424536 bp Ori: BBM45232.1 Feature: domain Description: PRK07726 Location: 1422482-1424354 bp Feature: domain Description: PRK07726 Location: 1 422482-1 424354 bp Feature: gene Location: 1424579-1429798 bp Ori: BBM45233.1 Feature: domain Description: PHA03411 Location: 1426166-1426412 bp Feature: domain Description: PHA0341 1 Location: 1 4261 66-1 42641 2 bp Feature: domain Description: COG4646 Location: 1426727-1429301 bp Feature: domain Description: COG4646 Location: 1 426727-1 429301 bp Feature: domain Description: Helicase_C Location: 1429376-1429712 bp Feature: domain Description: Helicase_C Location: 1 429376-1 42971 2 bp Feature: gene Location: 1430461-1430808 bp Ori: BBM45234.1 Feature: domain Description: RVT_N Location: 1430470-1430632 bp Feature: domain Description: RVT_N Location: 1 430470-1 430632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430677-1430773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 430677-1 430773 bp Feature: gene Location: 1430882-1431814 bp Ori: BBM45235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430885-1431326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 430885-1 431 326 bp Feature: domain Description: GIIM Note: maturase Location: 1431386-1431611 bp Feature: domain Description: GIIM Note: maturase Location: 1 431 386-1 431 61 1 bp Feature: gene Location: 1431948-1432721 bp Feature: gene Location: 1433126-1433293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), AdoMet_MTases (cl17173), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TPR (smart00028), TPR_8 (pfam13181), guaA (PRK00074)
RVT-UG7, COG2865 (Predicted transcriptional regulator, contains HTH domain ), PHA03411 (putative methyltransferase; Provisional), Helicase_C (pfam00271)