myRT

myRT report for GCA_007997855.1_ASM799785v1

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Seq: CP042601.1 Escherichia coli strain NCYU-29-69 plasmid pNCYU-29-69-2, complete sequence (78117 bp)
Overview 1 RT 1: 31329-34969 bp Neighborhood of RT #1 [31329, 35094] RVT_N RVT-GII RVT-GII GIIM DUF1380 Feature: gene Location: 31329-31448 bp Feature: gene Location: 31570-31770 bp Feature: gene Location: 32503-33084 bp Feature: domain Description: RVT_N Location: 32551-32788 bp Feature: domain Description: RVT_N Location: 32551 -32788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32839-33085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32839-33085 bp Feature: gene Location: 33260-34170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33281-33482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33281 -33482 bp Feature: domain Description: GIIM Note: maturase Location: 33533-33767 bp Feature: domain Description: GIIM Note: maturase Location: 33533-33767 bp Feature: gene Location: 34484-34675 bp Feature: gene Location: 34672-35094 bp Ori: QED66428.1 Feature: domain Description: DUF1380 Location: 34675-34969 bp Feature: domain Description: DUF1 380 Location: 34675-34969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF1380 (pfam07128)

Seq: CP042599.1 Escherichia coli strain NCYU-29-69 chromosome, complete genome (4995982 bp)
Overview 1 RT 1: 2452223-2456528 bp Neighborhood of RT #1 [2452223, 2456545] YhhI YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 2452223-2453359 bp Ori: QED64830.1 Feature: domain Description: YhhI Location: 2452226-2452589 bp Feature: domain Description: YhhI Location: 2 452 2 2 6-2 452 589 bp Feature: domain Description: YhhI Location: 2452646-2453000 bp Feature: domain Description: YhhI Location: 2 452 646-2 453000 bp Feature: domain Description: YhhI Location: 2453018-2453261 bp Feature: domain Description: YhhI Location: 2 453018-2 4532 61 bp Feature: gene Location: 2453535-2453726 bp Feature: domain Description: YhhI Location: 2453541-2453712 bp Feature: domain Description: YhhI Location: 2 453541-2 453712 bp Feature: gene Location: 2453806-2455056 bp Ori: QED64831.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454010-2454667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 454010-2 454667 bp Feature: domain Description: GIIM Note: maturase Location: 2454748-2454970 bp Feature: domain Description: GIIM Note: maturase Location: 2 454748-2 454970 bp Feature: gene Location: 2455131-2455399 bp Feature: gene Location: 2455589-2456545 bp Ori: QED66218.1 Feature: domain Description: YhhI Location: 2455592-2455937 bp Feature: domain Description: YhhI Location: 2 455592 -2 455937 bp Feature: domain Description: YhhI Location: 2455994-2456348 bp Feature: domain Description: YhhI Location: 2 455994-2 456348 bp Feature: domain Description: YhhI Location: 2456348-2456528 bp Feature: domain Description: YhhI Location: 2 456348-2 45652 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)