myRT

myRT report for GCA_008033295.1_ASM803329v1

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Seq: CP042868.1 Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence (279992 bp)
Overview 1 RT 1: 65430-72241 bp 2 RT 2: 88219-93661 bp 3 RT 3: 121781-126516 bp 4 RT 4: 146351-151363 bp Neighborhood of RT #1 [65430, 72264] DDE_Tnp_1 RVT-GII Glt_symporter HmoA Neighborhood of RT #2 [88219, 93661] HTH_28 rve RVT-GII Neighborhood of RT #3 [121781, 126524] umuC PRK10276 RVT-GII InsQ Y1_Tnp Neighborhood of RT #4 [146351, 151363] HHA RVT-GII INT_Cre_C Feature: gene Location: 65430-66188 bp Feature: gene Location: 66812-68020 bp Ori: QEF10056.1 Gene: tnp-2 Feature: domain Description: DDE_Tnp_1 Location: 67085-67793 bp Feature: domain Description: DDE_Tnp_1 Location: 67085-67793 bp Feature: gene Location: 68489-69973 bp Ori: QEF10057.1 Gene: retA-1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68891-69581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68891 -69581 bp Feature: gene Location: 70289-71500 bp Ori: QEF10058.1 Feature: domain Description: Glt_symporter Location: 70295-71387 bp Feature: domain Description: Glt_symporter Location: 70295-71 387 bp Feature: gene Location: 72091-72264 bp Ori: QEF10059.1 Gene: hmoA Feature: domain Description: HmoA Location: 72097-72241 bp Feature: domain Description: HmoA Location: 72097-72241 bp Feature: gene Location: 88219-88851 bp Feature: gene Location: 88880-90283 bp Ori: QEF10078.1 Gene: tnp-6 Feature: domain Description: HTH_28 Location: 88928-89069 bp Feature: domain Description: HTH_28 Location: 88928-89069 bp Feature: domain Description: rve Location: 89309-89675 bp Feature: domain Description: rve Location: 89309-89675 bp Feature: gene Location: 90476-91960 bp Ori: QEF10079.1 Gene: retA-2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90878-91568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90878-91 568 bp Feature: gene Location: 91988-92713 bp Feature: gene Location: 93182-93661 bp Feature: gene Location: 121781-123052 bp Ori: QEF10109.1 Gene: umuC-2 Feature: domain Description: umuC Location: 121784-123044 bp Feature: domain Description: umuC Location: 1 21 784-1 23044 bp Feature: gene Location: 123052-123474 bp Ori: QEF10110.1 Gene: umuD-2 Feature: domain Description: PRK10276 Location: 123058-123460 bp Feature: domain Description: PRK1 0276 Location: 1 23058-1 23460 bp Feature: gene Location: 123560-125044 bp Ori: QEF10111.1 Gene: retA-3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123962-124652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 23962-1 24652 bp Feature: gene Location: 125738-126124 bp Ori: QEF10112.1 Gene: insQ Feature: domain Description: InsQ Location: 125744-126074 bp Feature: domain Description: InsQ Location: 1 25744-1 26074 bp Feature: gene Location: 126177-126524 bp Ori: QEF10113.1 Gene: rayT Feature: domain Description: Y1_Tnp Location: 126309-126516 bp Feature: domain Description: Y1 _Tnp Location: 1 26309-1 2651 6 bp Feature: gene Location: 146351-147418 bp Feature: gene Location: 147504-147758 bp Ori: QEF10136.1 Feature: domain Description: HHA Location: 147555-147738 bp Feature: domain Description: HHA Location: 1 47555-1 47738 bp Feature: gene Location: 148274-149758 bp Ori: QEF10137.1 Gene: retA-4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148676-149366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48676-1 49366 bp Feature: gene Location: 149844-150980 bp Ori: QEF10138.1 Feature: domain Description: INT_Cre_C Location: 150267-150921 bp Feature: domain Description: INT_Cre_C Location: 1 50267-1 50921 bp Feature: gene Location: 151046-151363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, Glt_symporter (pfam03616), HmoA (COG2329), HTH_28 (pfam13518), rve (pfam00665), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsQ (COG0675), Y1_Tnp (pfam01797)
HHA (pfam05321), INT_Cre_C (cd00799)

Seq: CP042869.1 Escherichia coli strain ATCC BAA-196 plasmid unnamed2, complete sequence (44240 bp)
Overview 1 RT 1: 19093-24057 bp Neighborhood of RT #1 [19093, 24057] umuC PRK10276 RVT-GII Feature: gene Location: 19093-20364 bp Ori: QEF10286.1 Gene: umuC-2 Feature: domain Description: umuC Location: 19096-20356 bp Feature: domain Description: umuC Location: 19096-2 0356 bp Feature: gene Location: 20364-20786 bp Ori: QEF10287.1 Gene: umuD-2 Feature: domain Description: PRK10276 Location: 20370-20772 bp Feature: domain Description: PRK102 76 Location: 2 0370-2 0772 bp Feature: gene Location: 20872-22356 bp Ori: QEF10288.1 Gene: retA-3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21274-21964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 12 74-2 1964 bp Feature: gene Location: 22384-23109 bp Feature: gene Location: 23578-24057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII