myRT

myRT report for GCA_008033315.1_ASM803331v1

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Seq: CP042866.1 Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence (266396 bp)
Overview 1 RT 1: 65428-72239 bp 2 RT 2: 88218-93660 bp 3 RT 3: 132937-137672 bp 4 RT 4: 157507-162519 bp Neighborhood of RT #1 [65428, 72262] DDE_Tnp_1 RVT-GII Glt_symporter HmoA Neighborhood of RT #2 [88218, 93660] HTH_28 rve RVT-GII Neighborhood of RT #3 [132937, 137680] umuC PRK10276 RVT-GII InsQ Y1_Tnp Neighborhood of RT #4 [157507, 162519] HHA RVT-GII INT_Cre_C Feature: gene Location: 65428-66186 bp Feature: gene Location: 66810-68018 bp Ori: QEF14696.1 Gene: tnp-2 Feature: domain Description: DDE_Tnp_1 Location: 67083-67791 bp Feature: domain Description: DDE_Tnp_1 Location: 67083-67791 bp Feature: gene Location: 68487-69974 bp Ori: QEF14697.1 Gene: retA-4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68892-69582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68892-69582 bp Feature: gene Location: 70287-71498 bp Ori: QEF14698.1 Feature: domain Description: Glt_symporter Location: 70293-71385 bp Feature: domain Description: Glt_symporter Location: 70293-71 385 bp Feature: gene Location: 72089-72262 bp Ori: QEF14699.1 Gene: hmoA Feature: domain Description: HmoA Location: 72095-72239 bp Feature: domain Description: HmoA Location: 72095-72239 bp Feature: gene Location: 88218-88850 bp Feature: gene Location: 88879-90282 bp Ori: QEF14718.1 Gene: tnp-5 Feature: domain Description: HTH_28 Location: 88927-89068 bp Feature: domain Description: HTH_28 Location: 88927-89068 bp Feature: domain Description: rve Location: 89308-89674 bp Feature: domain Description: rve Location: 89308-89674 bp Feature: gene Location: 90475-91959 bp Ori: QEF14719.1 Gene: retA-3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90877-91567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90877-91 567 bp Feature: gene Location: 91987-92712 bp Feature: gene Location: 93181-93660 bp Feature: gene Location: 132937-134208 bp Ori: QEF14757.1 Gene: umuC-2 Feature: domain Description: umuC Location: 132940-134200 bp Feature: domain Description: umuC Location: 1 32940-1 34200 bp Feature: gene Location: 134208-134630 bp Ori: QEF14758.1 Gene: umuD-2 Feature: domain Description: PRK10276 Location: 134214-134616 bp Feature: domain Description: PRK1 0276 Location: 1 3421 4-1 3461 6 bp Feature: gene Location: 134716-136200 bp Ori: QEF14759.1 Gene: retA-2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135118-135808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 351 1 8-1 35808 bp Feature: gene Location: 136894-137280 bp Ori: QEF14760.1 Gene: insQ Feature: domain Description: InsQ Location: 136900-137230 bp Feature: domain Description: InsQ Location: 1 36900-1 37230 bp Feature: gene Location: 137333-137680 bp Ori: QEF14761.1 Gene: rayT Feature: domain Description: Y1_Tnp Location: 137465-137672 bp Feature: domain Description: Y1 _Tnp Location: 1 37465-1 37672 bp Feature: gene Location: 157507-158574 bp Feature: gene Location: 158660-158914 bp Ori: QEF14784.1 Feature: domain Description: HHA Location: 158711-158894 bp Feature: domain Description: HHA Location: 1 5871 1 -1 58894 bp Feature: gene Location: 159427-160914 bp Ori: QEF14785.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159832-160522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 59832-1 60522 bp Feature: gene Location: 161000-162136 bp Ori: QEF14786.1 Feature: domain Description: INT_Cre_C Location: 161423-162077 bp Feature: domain Description: INT_Cre_C Location: 1 61 423-1 62077 bp Feature: gene Location: 162202-162519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, Glt_symporter (pfam03616), HmoA (COG2329), HTH_28 (pfam13518), rve (pfam00665), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsQ (COG0675), Y1_Tnp (pfam01797)
HHA (pfam05321), INT_Cre_C (cd00799)