myRT

myRT report for GCA_008041975.1_ASM804197v1

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Seq: CP042929.1 Bacillus cereus strain G1-1 chromosome, complete genome (5544716 bp)
Overview 1 RT 1: 258060-267403 bp 2 RT 2: 1039645-1043935 bp 3 RT 3: 4054714-4058789 bp Neighborhood of RT #1 [258060, 267411] groES groEL RVT-UG8 RVT-UG3 guaA AzgA Neighborhood of RT #2 [1039645, 1043935] RimL RVT_N RVT-GII GIIM Neighborhood of RT #3 [4054714, 4058803] YugN amiF RVT-GII HNHc amiF Feature: gene Location: 258060-258344 bp Feature: domain Description: groES Location: 258063-258339 bp Feature: domain Description: groES Location: 258063-258339 bp Feature: gene Location: 258383-260017 bp Feature: domain Description: groEL Location: 258386-260003 bp Feature: domain Description: groEL Location: 258386-260003 bp Feature: gene Location: 260221-262134 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 260695-261160 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 260695-261 1 60 bp Feature: gene Location: 262483-263637 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 262678-263131 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 262678-2631 31 bp Feature: gene Location: 264154-265701 bp Feature: domain Description: guaA Location: 264175-265699 bp Feature: domain Description: guaA Location: 2641 75-265699 bp Feature: gene Location: 266086-267411 bp Feature: domain Description: AzgA Location: 266089-267403 bp Feature: domain Description: AzgA Location: 266089-267403 bp Feature: gene Location: 1039645-1039779 bp Feature: gene Location: 1040234-1040779 bp Feature: domain Description: RimL Location: 1040252-1040765 bp Feature: domain Description: RimL Location: 1 040252-1 040765 bp Feature: gene Location: 1041418-1043064 bp Feature: domain Description: RVT_N Location: 1041460-1041697 bp Feature: domain Description: RVT_N Location: 1 041 460-1 041 697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041751-1042411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 751 -1 04241 1 bp Feature: domain Description: GIIM Note: maturase Location: 1042480-1042711 bp Feature: domain Description: GIIM Note: maturase Location: 1 042480-1 04271 1 bp Feature: gene Location: 1043410-1043565 bp Feature: gene Location: 1043612-1043935 bp Feature: gene Location: 4054714-4055079 bp Feature: domain Description: YugN Location: 4054732-4054993 bp Feature: domain Description: YugN Location: 4054732-4054993 bp Feature: gene Location: 4055126-4055749 bp Feature: domain Description: amiF Location: 4055129-4055744 bp Feature: domain Description: amiF Location: 40551 29-4055744 bp Feature: gene Location: 4055866-4057698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4056166-4056871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40561 66-4056871 bp Feature: domain Description: HNHc Note: nucleases Location: 4057450-4057582 bp Feature: domain Description: HNHc Note: nucleases Location: 4057450-4057582 bp Feature: gene Location: 4058091-4058267 bp Feature: gene Location: 4058414-4058803 bp Feature: domain Description: amiF Location: 4058417-4058789 bp Feature: domain Description: amiF Location: 405841 7-4058789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-UG8, RVT-UG3, guaA (PRK00074), AzgA (COG2252), RimL (COG1670), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
YugN (pfam08868), amiF (PRK13287), HNHc (smart00507)

Seq: CP042928.1 Bacillus cereus strain G1-1 plasmid unnamed, complete sequence (319829 bp)
Overview 1 RT 1: 8018-14238 bp 2 RT 2: 26336-36222 bp 3 RT 3: 40740-45549 bp 4 RT 4: 122250-131039 bp 5 RT 5: 210837-217376 bp Neighborhood of RT #1 [8018, 14238] HELICc HNHc RVT_N RVT-GII DEXDc Neighborhood of RT #2 [26336, 36222] PRK06850 HEPN RVT-GII NT_KNTase_like PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #3 [40740, 45554] beta_clamp RVT-GII COG4712 Neighborhood of RT #4 [122250, 131039] TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #5 [210837, 217384] YwiC DDE_Tnp_Tn3 RVT-GII Intron_maturas2 HNHc COG4644 COG4644 PinE Feature: gene Location: 8018-9700 bp Feature: domain Description: HELICc Location: 8684-9083 bp Feature: domain Description: HELICc Location: 8684-9083 bp Feature: gene Location: 9761-10054 bp Feature: domain Description: HNHc Note: nucleases Location: 9782-9935 bp Feature: domain Description: HNHc Note: nucleases Location: 9782 -9935 bp Feature: gene Location: 10249-11559 bp Feature: domain Description: RVT_N Location: 10312-10459 bp Feature: domain Description: RVT_N Location: 10312 -10459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10552-11254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10552 -112 54 bp Feature: gene Location: 12260-13939 bp Feature: domain Description: DEXDc Location: 13040-13913 bp Feature: domain Description: DEXDc Location: 13040-13913 bp Feature: gene Location: 14011-14238 bp Feature: gene Location: 26336-28108 bp Feature: domain Description: PRK06850 Location: 26351-27581 bp Feature: domain Description: PRK06850 Location: 2 6351-2 7581 bp Feature: gene Location: 28233-28676 bp Feature: domain Description: HEPN Location: 28287-28635 bp Feature: domain Description: HEPN Location: 2 82 87-2 8635 bp Feature: gene Location: 28822-30753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29143-29878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9143-2 9878 bp Feature: gene Location: 31512-31910 bp Feature: domain Description: NT_KNTase_like Location: 31587-31887 bp Feature: domain Description: NT_KNTase_like Location: 31587-31887 bp Feature: gene Location: 31932-32303 bp Feature: gene Location: 32323-32865 bp Feature: domain Description: PRTRC_ThiF Location: 32386-32845 bp Feature: domain Description: PRTRC_ThiF Location: 32 386-32 845 bp Feature: gene Location: 33117-35057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33453-34284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33453-342 84 bp Feature: domain Description: Intron_maturas2 Location: 34410-34713 bp Feature: domain Description: Intron_maturas2 Location: 34410-34713 bp Feature: domain Description: HNHc Note: nucleases Location: 34845-35004 bp Feature: domain Description: HNHc Note: nucleases Location: 34845-35004 bp Feature: gene Location: 35626-35808 bp Feature: domain Description: E1_enzyme_family Location: 35674-35794 bp Feature: domain Description: E1_enzyme_family Location: 35674-35794 bp Feature: gene Location: 35821-36222 bp Feature: gene Location: 40740-41852 bp Feature: domain Description: beta_clamp Location: 40743-41847 bp Feature: domain Description: beta_clamp Location: 40743-41847 bp Feature: gene Location: 41933-42460 bp Feature: gene Location: 42538-44439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42856-43558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 856-43558 bp Feature: gene Location: 44634-44774 bp Feature: gene Location: 45198-45554 bp Feature: domain Description: COG4712 Location: 45207-45549 bp Feature: domain Description: COG4712 Location: 452 07-45549 bp Feature: gene Location: 122250-123221 bp Feature: domain Description: TraC-F-type Location: 122670-123144 bp Feature: domain Description: TraC-F-type Location: 12 2 670-12 3144 bp Feature: gene Location: 123368-123544 bp Feature: gene Location: 123937-125769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124237-124942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 42 37-12 4942 bp Feature: domain Description: HNHc Note: nucleases Location: 125521-125653 bp Feature: domain Description: HNHc Note: nucleases Location: 12 552 1-12 5653 bp Feature: gene Location: 126060-127028 bp Feature: domain Description: TraC-F-type Location: 126087-126867 bp Feature: domain Description: TraC-F-type Location: 12 6087-12 6867 bp Feature: gene Location: 127059-131039 bp Feature: gene Location: 210837-211079 bp Feature: domain Description: YwiC Location: 210873-211053 bp Feature: domain Description: YwiC Location: 2 10873-2 11053 bp Feature: gene Location: 211314-211976 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 211320-211920 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2 1132 0-2 1192 0 bp Feature: gene Location: 212119-213936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212383-213214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 12 383-2 132 14 bp Feature: domain Description: Intron_maturas2 Location: 213292-213586 bp Feature: domain Description: Intron_maturas2 Location: 2 132 92 -2 13586 bp Feature: domain Description: HNHc Note: nucleases Location: 213733-213910 bp Feature: domain Description: HNHc Note: nucleases Location: 2 13733-2 13910 bp Feature: gene Location: 214552-216813 bp Feature: domain Description: COG4644 Location: 214579-215485 bp Feature: domain Description: COG4644 Location: 2 14579-2 15485 bp Feature: domain Description: COG4644 Location: 216430-216802 bp Feature: domain Description: COG4644 Location: 2 16430-2 16802 bp Feature: gene Location: 216815-217384 bp Feature: domain Description: PinE Location: 216818-217376 bp Feature: domain Description: PinE Location: 2 16818-2 17376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), HNHc (smart00507), RVT_N (pfam13655), RVT-GII, DEXDc (smart00487), PRK06850 (hypothetical protein; Provisional), HEPN (smart00748), NT_KNTase_like (cd05403), PRTRC_ThiF (TIGR03736), Intron_maturas2 (pfam01348)
E1_enzyme_family (cl22428), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), TraC-F-type (TIGR02746), YwiC (pfam14256), DDE_Tnp_Tn3 (pfam01526), COG4644 (Transposase and inactivated derivatives, TnpA family ), PinE (COG1961)