myRT

myRT report for GCA_008253865.1_ASM825386v1

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Seq: CP042331.1 Bosea sp. F3-2 chromosome, complete genome (6379363 bp)
Overview 1 RT 1: 2245493-2253334 bp 2 RT 2: 3354199-3359056 bp Neighborhood of RT #1 [2245493, 2254401] ComA-like_MBL-fold ComA-like_MBL-fold M4_like RVT-UG16 DUF1837 BRR2 BRR2 Neighborhood of RT #2 [3354199, 3359094] retinol-DH_like_SDR_c_like MarR RVT-Retrons COG3547 Feature: gene Location: 2245493-2246779 bp Ori: QEL22938.1 Feature: domain Description: ComA-like_MBL-fold Location: 2245520-2245739 bp Feature: domain Description: ComA-like_MBL-fold Location: 2245520-2245739 bp Feature: domain Description: ComA-like_MBL-fold Location: 2246372-2246534 bp Feature: domain Description: ComA-like_MBL-fold Location: 2246372-2246534 bp Feature: gene Location: 2246776-2248509 bp Ori: QEL22939.1 Feature: domain Description: M4_like Location: 2246917-2247961 bp Feature: domain Description: M4_like Location: 224691 7-2247961 bp Feature: gene Location: 2248910-2250406 bp Ori: QEL22940.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2249294-2249693 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 2249294-2249693 bp Feature: gene Location: 2250707-2251786 bp Ori: QEL22941.1 Feature: domain Description: DUF1837 Location: 2250911-2251478 bp Feature: domain Description: DUF1 837 Location: 225091 1 -2251 478 bp Feature: gene Location: 2251783-2254401 bp Ori: QEL22942.1 Feature: domain Description: BRR2 Location: 2252269-2252659 bp Feature: domain Description: BRR2 Location: 2252269-2252659 bp Feature: domain Description: BRR2 Location: 2252908-2253334 bp Feature: domain Description: BRR2 Location: 2252908-2253334 bp Feature: gene Location: 3354199-3355071 bp Ori: QEL26608.1 Feature: domain Description: retinol-DH_like_SDR_c_like Location: 3354211-3355030 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 335421 1 -3355030 bp Feature: gene Location: 3355176-3355646 bp Ori: QEL23833.1 Feature: domain Description: MarR Location: 3355281-3355614 bp Feature: domain Description: MarR Location: 3355281 -335561 4 bp Feature: gene Location: 3355747-3356409 bp Ori: QEL23834.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3355948-3356296 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3355948-3356296 bp Feature: gene Location: 3356789-3357894 bp Feature: gene Location: 3358078-3359094 bp Ori: QEL23835.1 Feature: domain Description: COG3547 Location: 3358171-3359056 bp Feature: domain Description: COG3547 Location: 33581 71 -3359056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComA-like_MBL-fold (cd07731), M4_like (cd09598), RVT-UG16, DUF1837 (pfam08878), BRR2 (COG1204), retinol-DH_like_SDR_c_like (cd05327), MarR (pfam01047), RVT-Retrons, COG3547 (Transposase )