myRT

myRT report for GCA_008298035.1_ASM829803v1

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Seq: CP042910.1 Gimesia maris strain DSM 8797 chromosome, complete genome (7816689 bp)
Overview 1 RT 1: 1360351-1367908 bp 2 RT 2: 3826959-3833250 bp 3 RT 3: 4202943-4208202 bp Neighborhood of RT #1 [1360351, 1367913] PRK07561 RVT-Retrons S2P-M50_SpoIVFB MLE MR_MLE_C Neighborhood of RT #2 [3826959, 3833288] RVT-G2Lb zinc-ribbons_6 Neighborhood of RT #3 [4202943, 4208270] HTH_3 RVT-CRISPR-like HTH_Tnp_1 Tra5 Feature: gene Location: 1360351-1363080 bp Ori: QEG15251.1 Gene: topA Feature: domain Description: PRK07561 Location: 1360372-1362997 bp Feature: domain Description: PRK07561 Location: 1 360372-1 362997 bp Feature: gene Location: 1363098-1363865 bp Feature: gene Location: 1364012-1365286 bp Ori: QEG15253.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1364444-1365059 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 364444-1 365059 bp Feature: gene Location: 1365832-1366527 bp Ori: QEG15254.1 Gene: spoIVFB Feature: domain Description: S2P-M50_SpoIVFB Location: 1365901-1366510 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1 365901 -1 36651 0 bp Feature: gene Location: 1366561-1367913 bp Ori: QEG15255.1 Feature: domain Description: MLE Location: 1366609-1366765 bp Feature: domain Description: MLE Location: 1 366609-1 366765 bp Feature: domain Description: MR_MLE_C Location: 1367236-1367908 bp Feature: domain Description: MR_MLE_C Location: 1 367236-1 367908 bp Feature: gene Location: 3826959-3827738 bp Feature: gene Location: 3827752-3828024 bp Feature: gene Location: 3828350-3831142 bp Ori: QEG17081.1 Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 3830219-3830777 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 383021 9-3830777 bp Feature: gene Location: 3831204-3832658 bp Feature: gene Location: 3833040-3833288 bp Ori: QEG17083.1 Feature: domain Description: zinc-ribbons_6 Location: 3833049-3833250 bp Feature: domain Description: zinc-ribbons_6 Location: 3833049-3833250 bp Feature: gene Location: 4202943-4203731 bp Ori: QEG17335.1 Feature: domain Description: HTH_3 Location: 4203009-4203117 bp Feature: domain Description: HTH_3 Location: 4203009-42031 1 7 bp Feature: gene Location: 4203767-4205308 bp Feature: gene Location: 4205311-4206573 bp Ori: QEG17337.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4205671-4206208 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4205671 -4206208 bp Feature: gene Location: 4207096-4207383 bp Ori: QEG17338.1 Feature: domain Description: HTH_Tnp_1 Location: 4207108-4207330 bp Feature: domain Description: HTH_Tnp_1 Location: 42071 08-4207330 bp Feature: gene Location: 4207461-4208270 bp Ori: QEG17339.1 Feature: domain Description: Tra5 Location: 4207545-4208202 bp Feature: domain Description: Tra5 Location: 4207545-4208202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07561 (DNA topoisomerase I subunit omega; Validated), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), MLE (cd03318), MR_MLE_C (pfam13378), RVT-G2Lb, zinc-ribbons_6 (pfam07191), HTH_3 (pfam01381), RVT-CRISPR, HTH_Tnp_1 (pfam01527)
Tra5 (COG2801)