myRT

myRT report for GCA_008329945.1_ASM832994v1

Download annotations/find similar RTs

Seq: CP035808.1 Spirochaeta perfilievii strain P plasmid pSpe, complete sequence (32844 bp)
Overview 1 RT 1: 20116-23694 bp Neighborhood of RT #1 [20116, 23694] VirE_N RVT-UG28b Feature: gene Location: 20116-21153 bp Ori: QEN06434.1 Feature: domain Description: VirE_N Location: 20299-20668 bp Feature: domain Description: VirE_N Location: 20299-20668 bp Feature: gene Location: 21273-21890 bp Feature: gene Location: 22046-23032 bp Ori: QEN06436.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 22085-22469 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 22085-22469 bp Feature: gene Location: 23218-23430 bp Feature: gene Location: 23479-23694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), RVT-UG28b

Seq: CP035807.1 Spirochaeta perfilievii strain P chromosome, complete genome (3667739 bp)
Overview 1 RT 1: 21217-29598 bp 2 RT 2: 2553873-2556355 bp Neighborhood of RT #1 [21217, 29615] DEAH_box_HrpA ycfP RVT-GII MFS_FsR PRK05716 Neighborhood of RT #2 [2553873, 2556360] napH_ PRK12310 RVT-GII arc_metj RelE Feature: gene Location: 21217-25113 bp Ori: QEN03167.1 Gene: hrpA Feature: domain Description: DEAH_box_HrpA Location: 21244-25093 bp Feature: domain Description: DEAH_box_HrpA Location: 2 12 44-2 5093 bp Feature: gene Location: 25156-25722 bp Ori: QEN03168.1 Feature: domain Description: ycfP Location: 25174-25708 bp Feature: domain Description: ycfP Location: 2 5174-2 5708 bp Feature: gene Location: 25815-27149 bp Ori: QEN03169.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26094-26781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6094-2 6781 bp Feature: gene Location: 27640-28800 bp Ori: QEN03170.1 Feature: domain Description: MFS_FsR Location: 27685-28771 bp Feature: domain Description: MFS_FsR Location: 2 7685-2 8771 bp Feature: gene Location: 28854-29615 bp Ori: QEN03171.1 Gene: map Feature: domain Description: PRK05716 Location: 28866-29598 bp Feature: domain Description: PRK05716 Location: 2 8866-2 9598 bp Feature: gene Location: 2553873-2554505 bp Ori: QEN05349.1 Feature: domain Description: napH_ Location: 2553963-2554500 bp Feature: domain Description: napH_ Location: 2 553963-2 554500 bp Feature: gene Location: 2554574-2555218 bp Ori: QEN05350.1 Feature: domain Description: PRK12310 Location: 2554577-2555201 bp Feature: domain Description: PRK12 310 Location: 2 554577-2 5552 01 bp Feature: gene Location: 2555218-2555448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2555227-2555449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5552 2 7-2 555449 bp Feature: gene Location: 2555853-2556095 bp Ori: QEN05351.1 Feature: domain Description: arc_metj Location: 2555862-2555982 bp Feature: domain Description: arc_metj Location: 2 555862 -2 555982 bp Feature: gene Location: 2556088-2556360 bp Ori: QEN05352.1 Feature: domain Description: RelE Location: 2556103-2556355 bp Feature: domain Description: RelE Location: 2 556103-2 556355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEAH_box_HrpA (TIGR01967), ycfP (COG3150), RVT-GII, MFS_FsR (cd17478), PRK05716 (methionine aminopeptidase; Validated), napH_ (TIGR02163), PRK12310 (hydroxylamine reductase; Provisional), arc_metj (LOAD_arc_metj), RelE (pfam06296)