myRT

myRT report for GCA_008365235.1_ASM836523v1

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Seq: CP043511.1 Enterobacter kobei strain EB_P8_L5_01.19 chromosome, complete genome (4801031 bp)
Overview 1 RT 1: 1423742-1429043 bp 2 RT 2: 3053626-3056588 bp 3 RT 3: 4684221-4689055 bp Neighborhood of RT #1 [1423742, 1429054] COG3515 VasL Ogr_Delta RVT-Retrons INT_P4_C Neighborhood of RT #2 [3053626, 3056588] RVT-Retrons HTH_XRE Neighborhood of RT #3 [4684221, 4689162] PRK09692 HTH_Tnp_1 rve_3 RVT-UG28 DUF3950 PRK13605 Feature: gene Location: 1423742-1425061 bp Ori: QEO00570.1 Feature: domain Description: COG3515 Location: 1423754-1424282 bp Feature: domain Description: COG351 5 Location: 1 423754-1 424282 bp Feature: domain Description: VasL Location: 1424609-1425041 bp Feature: domain Description: VasL Location: 1 424609-1 425041 bp Feature: gene Location: 1425559-1425815 bp Feature: domain Description: Ogr_Delta Location: 1425586-1425718 bp Feature: domain Description: Ogr_Delta Location: 1 425586-1 42571 8 bp Feature: gene Location: 1426538-1427722 bp Ori: QEO00571.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1426688-1427267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 426688-1 427267 bp Feature: gene Location: 1428231-1428761 bp Feature: gene Location: 1428764-1429054 bp Ori: QEO00573.1 Feature: domain Description: INT_P4_C Location: 1428818-1429043 bp Feature: domain Description: INT_P4_C Location: 1 42881 8-1 429043 bp Feature: gene Location: 3053626-3053961 bp Feature: gene Location: 3054039-3054689 bp Feature: gene Location: 3054908-3056008 bp Ori: QEO01993.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3055049-3055604 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3055049-3055604 bp Feature: gene Location: 3056001-3056282 bp Ori: QEO01994.1 Feature: domain Description: HTH_XRE Location: 3056016-3056181 bp Feature: domain Description: HTH_XRE Location: 305601 6-30561 81 bp Feature: gene Location: 3056373-3056588 bp Feature: gene Location: 4684221-4685420 bp Ori: QEO03389.1 Feature: domain Description: PRK09692 Location: 4684230-4685382 bp Feature: domain Description: PRK09692 Location: 4684230-4685382 bp Feature: gene Location: 4685454-4686575 bp Feature: domain Description: HTH_Tnp_1 Location: 4685460-4685571 bp Feature: domain Description: HTH_Tnp_1 Location: 4685460-4685571 bp Feature: domain Description: rve_3 Location: 4686444-4686510 bp Feature: domain Description: rve_3 Location: 4686444-468651 0 bp Feature: gene Location: 4686780-4688285 bp Ori: QEO03390.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 4687071-4687707 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 4687071 -4687707 bp Feature: gene Location: 4688531-4688692 bp Ori: QEO03391.1 Feature: domain Description: DUF3950 Location: 4688606-4688681 bp Feature: domain Description: DUF3950 Location: 4688606-4688681 bp Feature: gene Location: 4688821-4689162 bp Ori: QEO03392.1 Feature: domain Description: PRK13605 Location: 4688824-4689055 bp Feature: domain Description: PRK1 3605 Location: 4688824-4689055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3515 (Predicted component of the type VI protein secretion system ), VasL (pfam12486), Ogr_Delta (pfam04606), RVT-Retrons, INT_P4_C (cd00801), HTH_XRE (smart00530), PRK09692 (Integrase; provisional), HTH_Tnp_1 (pfam01527), rve_3 (pfam13683), RVT-UG28
DUF3950 (pfam13132), PRK13605 (endoribonuclease SymE; Provisional)