myRT

myRT report for GCA_008370165.1_ASM837016v1

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Seq: AP019531.1 Serratia symbiotica IS DNA, complete genome (2736352 bp)
Overview 1 RT 1: 406793-413861 bp 2 RT 2: 1049613-1055932 bp 3 RT 3: 1638610-1641327 bp 4 RT 4: 1684656-1690043 bp Neighborhood of RT #1 [406793, 413899] PRK15015 DDE_Tnp_1_5 RVT-Retrons DUF4755 Neighborhood of RT #2 [1049613, 1055932] PRK15419 Transposase_31 RVT-GII GIIM Neighborhood of RT #3 [1638610, 1641729] RVT-GII GIIM PRK10931 PRK11570 Neighborhood of RT #4 [1684656, 1690054] TraF_2 RVT-GII GIIM IS285 IS285 Feature: gene Location: 406793-408944 bp Gene: unitary Feature: domain Description: PRK15015 Location: 406817-407327 bp Feature: domain Description: PRK1 501 5 Location: 40681 7-407327 bp Feature: gene Location: 409447-410370 bp Ori: BBI91342.1 Feature: domain Description: DDE_Tnp_1_5 Location: 409504-409837 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 409504-409837 bp Feature: gene Location: 410654-412486 bp Gene: unitary Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 410789-411485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 0789-41 1 485 bp Feature: gene Location: 412600-412713 bp Feature: gene Location: 413303-413899 bp Gene: unitary Feature: domain Description: DUF4755 Location: 413516-413861 bp Feature: domain Description: DUF4755 Location: 41 351 6-41 3861 bp Feature: gene Location: 1049613-1051097 bp Ori: BBI91806.1 Gene: putP Feature: domain Description: PRK15419 Location: 1049616-1051089 bp Feature: domain Description: PRK1 541 9 Location: 1 04961 6-1 051 089 bp Feature: gene Location: 1051475-1051759 bp Gene: unitary Feature: domain Description: Transposase_31 Location: 1051490-1051760 bp Feature: domain Description: Transposase_31 Location: 1 051 490-1 051 760 bp Feature: gene Location: 1052108-1052452 bp Gene: unitary Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052111-1052171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0521 1 1 -1 0521 71 bp Feature: domain Description: GIIM Note: maturase Location: 1052222-1052453 bp Feature: domain Description: GIIM Note: maturase Location: 1 052222-1 052453 bp Feature: gene Location: 1052712-1053138 bp Feature: gene Location: 1053853-1055932 bp Feature: gene Location: 1638610-1638726 bp Feature: gene Location: 1639207-1639341 bp Feature: gene Location: 1639429-1639946 bp Gene: unitary Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639441-1639621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 639441 -1 639621 bp Feature: domain Description: GIIM Note: maturase Location: 1639714-1639894 bp Feature: domain Description: GIIM Note: maturase Location: 1 63971 4-1 639894 bp Feature: gene Location: 1640029-1640769 bp Ori: BBI92211.1 Gene: cysQ Feature: domain Description: PRK10931 Location: 1640032-1640767 bp Feature: domain Description: PRK1 0931 Location: 1 640032-1 640767 bp Feature: gene Location: 1641111-1641729 bp Gene: unitary Feature: domain Description: PRK11570 Location: 1641114-1641327 bp Feature: domain Description: PRK1 1 570 Location: 1 641 1 1 4-1 641 327 bp Feature: gene Location: 1684656-1685651 bp Feature: gene Location: 1685756-1686964 bp Ori: BBI92249.1 Gene: traF Feature: domain Description: TraF_2 Location: 1685912-1686716 bp Feature: domain Description: TraF_2 Location: 1 68591 2-1 68671 6 bp Feature: gene Location: 1687854-1689122 bp Ori: BBI92250.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1687962-1688694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 687962-1 688694 bp Feature: domain Description: GIIM Note: maturase Location: 1688772-1688967 bp Feature: domain Description: GIIM Note: maturase Location: 1 688772-1 688967 bp Feature: gene Location: 1689558-1689680 bp Ori: BBI92251.1 Feature: domain Description: IS285 Location: 1689564-1689675 bp Feature: domain Description: IS285 Location: 1 689564-1 689675 bp Feature: gene Location: 1689761-1690054 bp Ori: BBI92252.1 Feature: domain Description: IS285 Location: 1689770-1690043 bp Feature: domain Description: IS285 Location: 1 689770-1 690043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15015 (carbon starvation protein CstA), DDE_Tnp_1_5 (pfam13737), RVT-Retrons, DUF4755 (pfam15947), PRK15419 (sodium/proline symporter PutP), Transposase_31 (pfam04754), RVT-GII, GIIM (pfam08388), PRK10931 (adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional), PRK11570 (peptidyl-prolyl cis-trans isomerase; Provisional)
TraF_2 (pfam13729), IS285 (COG3328)