myRT

myRT report for GCA_008693405.1_ASM869340v1

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Seq: CP044039.1 Klebsiella pneumoniae strain FDAARGOS_630 chromosome, complete genome (5266224 bp)
Overview 1 RT 1: 4533067-4536127 bp Neighborhood of RT #1 [4533067, 4536127] DinI HTH_XRE RVT-Retrons Feature: gene Location: 4533067-4533507 bp Ori: QET11224.1 Feature: domain Description: DinI Location: 4533322-4533505 bp Feature: domain Description: DinI Location: 4533322-4533505 bp Feature: gene Location: 4534128-4534436 bp Ori: QET11225.1 Feature: domain Description: HTH_XRE Location: 4534140-4534305 bp Feature: domain Description: HTH_XRE Location: 45341 40-4534305 bp Feature: gene Location: 4534414-4535364 bp Ori: QET11226.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4534594-4535137 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4534594-45351 37 bp Feature: gene Location: 4535503-4535934 bp Feature: gene Location: 4535933-4536127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons

Seq: CP044038.1 Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed4, complete sequence (77529 bp)
Overview 1 RT 1: 68588-72671 bp Neighborhood of RT #1 [68588, 72808] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 68588-69019 bp Ori: QET07172.1 Gene: umuD Feature: domain Description: PRK10276 Location: 68639-69002 bp Feature: domain Description: PRK102 76 Location: 68639-69002 bp Feature: gene Location: 69179-69430 bp Feature: gene Location: 69430-70914 bp Ori: QET07195.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69832-70522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69832 -7052 2 bp Feature: gene Location: 71163-72134 bp Ori: QET07174.1 Feature: domain Description: StbA Location: 71166-72111 bp Feature: domain Description: StbA Location: 71166-72 111 bp Feature: gene Location: 72137-72808 bp Ori: QET07175.1 Feature: domain Description: Plasmid_stab_B Location: 72152-72359 bp Feature: domain Description: Plasmid_stab_B Location: 72 152 -72 359 bp Feature: domain Description: Plasmid_stab_B Location: 72464-72671 bp Feature: domain Description: Plasmid_stab_B Location: 72 464-72 671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)