myRT

myRT report for GCA_008693465.1_ASM869346v1

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Seq: CP044051.1 Klebsiella variicola strain FDAARGOS_627 plasmid unnamed2, complete sequence (282877 bp)
Overview 1 RT 1: 156617-161537 bp 2 RT 2: 171228-175089 bp 3 RT 3: 189333-193484 bp Neighborhood of RT #1 [156617, 161560] InsE RVT-GII GIIM PHA02517 GAF_3 PRK09776 PRK09776 Neighborhood of RT #2 [171228, 175097] Rve RVT-GII GIIM PHA02517 APH Neighborhood of RT #3 [189333, 193528] InsE RVT-GII GIIM PHA02517 PinE Feature: gene Location: 156617-157296 bp Feature: domain Description: InsE Location: 156629-156887 bp Feature: domain Description: InsE Location: 1 56629-1 56887 bp Feature: gene Location: 157250-157660 bp Feature: gene Location: 157969-159477 bp Ori: QET28274.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158227-158959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58227-1 58959 bp Feature: domain Description: GIIM Note: maturase Location: 159034-159232 bp Feature: domain Description: GIIM Note: maturase Location: 1 59034-1 59232 bp Feature: gene Location: 159558-160034 bp Feature: domain Description: PHA02517 Location: 159561-160026 bp Feature: domain Description: PHA0251 7 Location: 1 59561 -1 60026 bp Feature: gene Location: 160091-161560 bp Ori: QET28275.1 Feature: domain Description: GAF_3 Location: 160163-160577 bp Feature: domain Description: GAF_3 Location: 1 601 63-1 60577 bp Feature: domain Description: PRK09776 Location: 160655-161021 bp Feature: domain Description: PRK09776 Location: 1 60655-1 61 021 bp Feature: domain Description: PRK09776 Location: 161045-161537 bp Feature: domain Description: PRK09776 Location: 1 61 045-1 61 537 bp Feature: gene Location: 171228-171467 bp Feature: domain Description: Rve Location: 171249-171468 bp Feature: domain Description: Rve Location: 1 71 249-1 71 468 bp Feature: gene Location: 171463-171831 bp Feature: gene Location: 172140-173648 bp Ori: QET28276.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172398-173130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 72398-1 731 30 bp Feature: domain Description: GIIM Note: maturase Location: 173205-173403 bp Feature: domain Description: GIIM Note: maturase Location: 1 73205-1 73403 bp Feature: gene Location: 173729-174187 bp Feature: domain Description: PHA02517 Location: 173732-174179 bp Feature: domain Description: PHA0251 7 Location: 1 73732-1 741 79 bp Feature: gene Location: 174294-175097 bp Ori: QET28158.1 Gene: aph(3'')-Ib Feature: domain Description: APH Location: 174336-175089 bp Feature: domain Description: APH Location: 1 74336-1 75089 bp Feature: gene Location: 189333-190048 bp Feature: domain Description: InsE Location: 189357-189642 bp Feature: domain Description: InsE Location: 1 89357-1 89642 bp Feature: gene Location: 189990-190412 bp Feature: gene Location: 190721-192229 bp Ori: QET28278.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190979-191711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90979-1 91 71 1 bp Feature: domain Description: GIIM Note: maturase Location: 191786-191984 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 786-1 91 984 bp Feature: gene Location: 192310-192795 bp Feature: domain Description: PHA02517 Location: 192316-192757 bp Feature: domain Description: PHA0251 7 Location: 1 9231 6-1 92757 bp Feature: gene Location: 192914-193528 bp Ori: QET28171.1 Feature: domain Description: PinE Location: 192917-193484 bp Feature: domain Description: PinE Location: 1 9291 7-1 93484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), GAF_3 (pfam13492), PRK09776 (putative diguanylate cyclase; Provisional), Rve (COG3316), APH (pfam01636), PinE (COG1961)

Seq: CP044049.1 Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence (213613 bp)
Overview 1 RT 1: 124704-128647 bp Neighborhood of RT #1 [124704, 128661] AraC_binding HTH_18 RVT-GII PRK10276 Feature: gene Location: 124704-125498 bp Ori: QET22811.1 Feature: domain Description: AraC_binding Location: 124818-125022 bp Feature: domain Description: AraC_binding Location: 12 4818-12 502 2 bp Feature: domain Description: HTH_18 Location: 125256-125484 bp Feature: domain Description: HTH_18 Location: 12 52 56-12 5484 bp Feature: gene Location: 125883-126113 bp Feature: gene Location: 126347-127831 bp Ori: QET22879.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126749-127439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6749-12 7439 bp Feature: gene Location: 127831-128082 bp Feature: gene Location: 128236-128661 bp Ori: QET22813.1 Gene: umuD Feature: domain Description: PRK10276 Location: 128239-128647 bp Feature: domain Description: PRK102 76 Location: 12 82 39-12 8647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC_binding (pfam02311), HTH_18 (pfam12833), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)