myRT

myRT report for GCA_008693585.1_ASM869358v1

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Seq: CP044090.1 Streptococcus agalactiae strain FDAARGOS_670 chromosome, complete genome (2210718 bp)
Overview 1 RT 1: 428551-439417 bp 2 RT 2: 1208083-1211120 bp 3 RT 3: 2088873-2091753 bp Neighborhood of RT #1 [428551, 439485] UPF0236 Peptidases_S8_C5a_Peptidase fn3_5 CHU_C RVT-GII GIIM AdcA strep_his_triad strep_his_triad strep_his_triad Neighborhood of RT #2 [1208083, 1211194] RusA RVT-GII GIIM PRK07275 Neighborhood of RT #3 [2088873, 2091926] PRK07275 PRK07275 RVT-GII GIIM HTH_XRE Feature: gene Location: 428551-429885 bp Ori: QET53150.1 Feature: domain Description: UPF0236 Location: 428581-429709 bp Feature: domain Description: UPF0236 Location: 428581 -429709 bp Feature: gene Location: 430540-433812 bp Ori: QET53151.1 Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 430885-432283 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 430885-432283 bp Feature: domain Description: fn3_5 Location: 432331-432661 bp Feature: domain Description: fn3_5 Location: 432331 -432661 bp Feature: domain Description: CHU_C Location: 432997-433291 bp Feature: domain Description: CHU_C Location: 432997-433291 bp Feature: gene Location: 434573-435850 bp Ori: QET53152.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434777-435392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434777-435392 bp Feature: domain Description: GIIM Note: maturase Location: 435446-435662 bp Feature: domain Description: GIIM Note: maturase Location: 435446-435662 bp Feature: gene Location: 436084-437004 bp Ori: QET53153.1 Gene: lmb Feature: domain Description: AdcA Location: 436177-437002 bp Feature: domain Description: AdcA Location: 4361 77-437002 bp Feature: gene Location: 437017-439485 bp Ori: QET53154.1 Feature: domain Description: strep_his_triad Location: 437023-438136 bp Feature: domain Description: strep_his_triad Location: 437023-4381 36 bp Feature: domain Description: strep_his_triad Location: 438274-438805 bp Feature: domain Description: strep_his_triad Location: 438274-438805 bp Feature: domain Description: strep_his_triad Location: 438973-439417 bp Feature: domain Description: strep_his_triad Location: 438973-43941 7 bp Feature: gene Location: 1208083-1208559 bp Ori: QET53867.1 Feature: domain Description: RusA Location: 1208113-1208545 bp Feature: domain Description: RusA Location: 1 2081 1 3-1 208545 bp Feature: gene Location: 1208549-1208752 bp Feature: gene Location: 1208878-1210197 bp Ori: QET53868.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1209178-1209811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2091 78-1 20981 1 bp Feature: domain Description: GIIM Note: maturase Location: 1209880-1210102 bp Feature: domain Description: GIIM Note: maturase Location: 1 209880-1 21 01 02 bp Feature: gene Location: 1210627-1210704 bp Feature: gene Location: 1210778-1211194 bp Ori: QET53869.1 Feature: domain Description: PRK07275 Location: 1210781-1211120 bp Feature: domain Description: PRK07275 Location: 1 21 0781 -1 21 1 1 20 bp Feature: gene Location: 2088873-2089289 bp Ori: QET54707.1 Feature: domain Description: PRK07275 Location: 2088876-2089212 bp Feature: domain Description: PRK07275 Location: 2088876-208921 2 bp Feature: domain Description: PRK07275 Location: 2089239-2089287 bp Feature: domain Description: PRK07275 Location: 2089239-2089287 bp Feature: gene Location: 2089363-2089440 bp Feature: gene Location: 2089870-2091189 bp Ori: QET54708.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2090170-2090803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20901 70-2090803 bp Feature: domain Description: GIIM Note: maturase Location: 2090872-2091094 bp Feature: domain Description: GIIM Note: maturase Location: 2090872-2091 094 bp Feature: gene Location: 2091322-2091582 bp Feature: gene Location: 2091567-2091926 bp Ori: QET54710.1 Feature: domain Description: HTH_XRE Location: 2091591-2091753 bp Feature: domain Description: HTH_XRE Location: 2091 591 -2091 753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0236 (pfam06782), Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), CHU_C (pfam13585), RVT-GII, GIIM (pfam08388), AdcA (cd01017), strep_his_triad (TIGR01363), RusA (pfam05866), PRK07275 (single-stranded DNA-binding protein; Provisional)
HTH_XRE (smart00530)