myRT

myRT report for GCA_008693685.1_ASM869368v1

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Seq: CP044069.1 Vibrio vulnificus strain FDAARGOS_663 chromosome 2, complete sequence (3249353 bp)
Overview 1 RT 1: 184885-199022 bp 2 RT 2: 1819845-1822772 bp 3 RT 3: 1849758-1852875 bp 4 RT 4: 1886134-1889367 bp 5 RT 5: 1892377-1895971 bp 6 RT 6: 1951816-1954816 bp Neighborhood of RT #1 [184885, 199027] PRK03918 SMC_prok_B RVT-UG17 SLATT_5 PRK09726 AE_Prim_S_like RVT-UG10 HTH_23 SufI Neighborhood of RT #2 [1819845, 1822772] DUF3265 RVT-GII GIIM DUF3265 Neighborhood of RT #3 [1849758, 1852877] DUF3265 RVT-GII GIIM DUF3265 Neighborhood of RT #4 [1886134, 1889367] DUF3265 RVT-GII GIIM Neighborhood of RT #5 [1892377, 1895971] Acetyltransf_9 DUF3265 RVT-GII GIIM DUF3265 Neighborhood of RT #6 [1951816, 1954816] DUF3265 RVT-GII GIIM DUF3265 Feature: gene Location: 184885-185655 bp Ori: QET75002.1 Feature: domain Description: PRK03918 Location: 185194-185635 bp Feature: domain Description: PRK0391 8 Location: 1 851 94-1 85635 bp Feature: gene Location: 185884-187446 bp Ori: QET75003.1 Feature: domain Description: SMC_prok_B Location: 186829-187345 bp Feature: domain Description: SMC_prok_B Location: 1 86829-1 87345 bp Feature: gene Location: 187804-189135 bp Ori: QET75004.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 188032-188635 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 88032-1 88635 bp Feature: gene Location: 189137-189775 bp Ori: QET75005.1 Feature: domain Description: SLATT_5 Location: 189146-189737 bp Feature: domain Description: SLATT_5 Location: 1 891 46-1 89737 bp Feature: gene Location: 190242-190496 bp Ori: QET75006.1 Feature: domain Description: PRK09726 Location: 190248-190452 bp Feature: domain Description: PRK09726 Location: 1 90248-1 90452 bp Feature: gene Location: 190901-196228 bp Ori: QET75007.1 Feature: domain Description: AE_Prim_S_like Location: 190976-191285 bp Feature: domain Description: AE_Prim_S_like Location: 1 90976-1 91 285 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 192236-192893 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 92236-1 92893 bp Feature: gene Location: 196779-197448 bp Feature: domain Description: HTH_23 Location: 196782-196917 bp Feature: domain Description: HTH_23 Location: 1 96782-1 9691 7 bp Feature: gene Location: 197642-199027 bp Ori: QET75008.1 Feature: domain Description: SufI Location: 197657-199022 bp Feature: domain Description: SufI Location: 1 97657-1 99022 bp Feature: gene Location: 1819845-1819967 bp Ori: QET77667.1 Feature: domain Description: DUF3265 Location: 1819872-1819953 bp Feature: domain Description: DUF3265 Location: 1 81 9872-1 81 9953 bp Feature: gene Location: 1820104-1820289 bp Feature: gene Location: 1820377-1821738 bp Ori: QET76373.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1820656-1821349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 820656-1 821 349 bp Feature: domain Description: GIIM Note: maturase Location: 1821433-1821637 bp Feature: domain Description: GIIM Note: maturase Location: 1 821 433-1 821 637 bp Feature: gene Location: 1822240-1822371 bp Ori: QET76374.1 Feature: domain Description: DUF3265 Location: 1822270-1822351 bp Feature: domain Description: DUF3265 Location: 1 822270-1 822351 bp Feature: gene Location: 1822383-1822772 bp Feature: gene Location: 1849758-1849880 bp Ori: QET77680.1 Feature: domain Description: DUF3265 Location: 1849785-1849866 bp Feature: domain Description: DUF3265 Location: 1 849785-1 849866 bp Feature: gene Location: 1850012-1850209 bp Feature: gene Location: 1850297-1851658 bp Ori: QET76407.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850576-1851269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 850576-1 851 269 bp Feature: domain Description: GIIM Note: maturase Location: 1851353-1851557 bp Feature: domain Description: GIIM Note: maturase Location: 1 851 353-1 851 557 bp Feature: gene Location: 1852285-1852650 bp Feature: gene Location: 1852752-1852877 bp Ori: QET77681.1 Feature: domain Description: DUF3265 Location: 1852794-1852875 bp Feature: domain Description: DUF3265 Location: 1 852794-1 852875 bp Feature: gene Location: 1886134-1886307 bp Ori: QET77702.1 Feature: domain Description: DUF3265 Location: 1886173-1886254 bp Feature: domain Description: DUF3265 Location: 1 8861 73-1 886254 bp Feature: gene Location: 1886195-1886386 bp Feature: gene Location: 1886711-1888072 bp Ori: QET76456.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1886990-1887683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 886990-1 887683 bp Feature: domain Description: GIIM Note: maturase Location: 1887767-1887971 bp Feature: domain Description: GIIM Note: maturase Location: 1 887767-1 887971 bp Feature: gene Location: 1888619-1888699 bp Feature: gene Location: 1888903-1889367 bp Feature: gene Location: 1892377-1892889 bp Ori: QET76464.1 Feature: domain Description: Acetyltransf_9 Location: 1892500-1892746 bp Feature: domain Description: Acetyltransf_9 Location: 1 892500-1 892746 bp Feature: gene Location: 1892861-1893028 bp Ori: QET77706.1 Feature: domain Description: DUF3265 Location: 1892888-1892969 bp Feature: domain Description: DUF3265 Location: 1 892888-1 892969 bp Feature: gene Location: 1893444-1894805 bp Ori: QET76465.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1893723-1894416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 893723-1 89441 6 bp Feature: domain Description: GIIM Note: maturase Location: 1894500-1894704 bp Feature: domain Description: GIIM Note: maturase Location: 1 894500-1 894704 bp Feature: gene Location: 1895307-1895402 bp Ori: QET76466.1 Feature: domain Description: DUF3265 Location: 1895310-1895382 bp Feature: domain Description: DUF3265 Location: 1 89531 0-1 895382 bp Feature: gene Location: 1895450-1895971 bp Feature: gene Location: 1951816-1951998 bp Ori: QET77740.1 Feature: domain Description: DUF3265 Location: 1951843-1951924 bp Feature: domain Description: DUF3265 Location: 1 951 843-1 951 924 bp Feature: gene Location: 1952054-1952367 bp Feature: gene Location: 1952417-1953778 bp Ori: QET76538.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1952696-1953389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 952696-1 953389 bp Feature: domain Description: GIIM Note: maturase Location: 1953473-1953677 bp Feature: domain Description: GIIM Note: maturase Location: 1 953473-1 953677 bp Feature: gene Location: 1954297-1954440 bp Ori: QET76539.1 Feature: domain Description: DUF3265 Location: 1954357-1954438 bp Feature: domain Description: DUF3265 Location: 1 954357-1 954438 bp Feature: gene Location: 1954403-1954816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03918 (DNA double-strand break repair ATPase Rad50), SMC_prok_B (TIGR02168), RVT-UG17, SLATT_5 (pfam18160), PRK09726 (type II toxin-antitoxin system antitoxin HipB), AE_Prim_S_like (cl01287), RVT-UG10, HTH_23 (pfam13384), SufI (COG2132), DUF3265 (pfam11665)
RVT-GII, GIIM (pfam08388), Acetyltransf_9 (pfam13527)