myRT

myRT report for GCA_008704475.1_ASM870447v1

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Seq: CP023698.1 Streptomyces viridifaciens strain ATCC 11989 chromosome, complete genome (7757877 bp)
Overview 1 RT 1: 6513360-6519101 bp 2 RT 2: 7597701-7602809 bp 3 RT 3: 7671696-7675989 bp Neighborhood of RT #1 [6513360, 6519101] PrfC RVT-GII Intron_maturas2 HNHc DUF4096 Neighborhood of RT #2 [7597701, 7602809] TPR_19 TPR_19 RVT-GII Intron_maturas2 HNHc DUF4096 Neighborhood of RT #3 [7671696, 7675989] DUF4096 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_2 Feature: gene Location: 6513360-6513755 bp Feature: gene Location: 6514483-6516096 bp Ori: QEV02747.1 Feature: domain Description: PrfC Location: 6514519-6516076 bp Feature: domain Description: PrfC Location: 651 451 9-651 6076 bp Feature: gene Location: 6516442-6518127 bp Ori: QEV04308.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6516607-6517402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651 6607-651 7402 bp Feature: domain Description: Intron_maturas2 Location: 6517519-6517732 bp Feature: domain Description: Intron_maturas2 Location: 651 751 9-651 7732 bp Feature: domain Description: HNHc Note: nucleases Location: 6517927-6518083 bp Feature: domain Description: HNHc Note: nucleases Location: 651 7927-651 8083 bp Feature: gene Location: 6519101-6519449 bp Ori: QEV02748.1 Feature: domain Description: DUF4096 Location: 6519134-6519362 bp Feature: domain Description: DUF4096 Location: 651 91 34-651 9362 bp Feature: gene Location: 6518683-6519101 bp Feature: gene Location: 7597701-7598195 bp Feature: gene Location: 7598543-7599898 bp Ori: QEV03522.1 Feature: domain Description: TPR_19 Location: 7599308-7599461 bp Feature: domain Description: TPR_1 9 Location: 7599308-7599461 bp Feature: domain Description: TPR_19 Location: 7599647-7599770 bp Feature: domain Description: TPR_1 9 Location: 7599647-7599770 bp Feature: gene Location: 7600150-7601835 bp Ori: QEV04394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7600315-7601110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760031 5-7601 1 1 0 bp Feature: domain Description: Intron_maturas2 Location: 7601227-7601440 bp Feature: domain Description: Intron_maturas2 Location: 7601 227-7601 440 bp Feature: domain Description: HNHc Note: nucleases Location: 7601635-7601791 bp Feature: domain Description: HNHc Note: nucleases Location: 7601 635-7601 791 bp Feature: gene Location: 7602809-7603157 bp Ori: QEV03523.1 Feature: domain Description: DUF4096 Location: 7602842-7603070 bp Feature: domain Description: DUF4096 Location: 7602842-7603070 bp Feature: gene Location: 7602391-7602809 bp Feature: gene Location: 7671696-7672044 bp Ori: QEV03584.1 Feature: domain Description: DUF4096 Location: 7671729-7671957 bp Feature: domain Description: DUF4096 Location: 7671 729-7671 957 bp Feature: gene Location: 7672044-7672462 bp Feature: gene Location: 7673018-7674703 bp Ori: QEV04399.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7673183-7673978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76731 83-7673978 bp Feature: domain Description: Intron_maturas2 Location: 7674095-7674308 bp Feature: domain Description: Intron_maturas2 Location: 7674095-7674308 bp Feature: domain Description: HNHc Note: nucleases Location: 7674503-7674659 bp Feature: domain Description: HNHc Note: nucleases Location: 7674503-7674659 bp Feature: gene Location: 7674943-7675224 bp Feature: domain Description: DDE_Tnp_1_2 Location: 7674946-7675219 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 7674946-767521 9 bp Feature: gene Location: 7675708-7675989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrfC (COG4108), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4096 (pfam13340), TPR_19 (pfam14559), DDE_Tnp_1_2 (pfam13586)