myRT

myRT report for GCA_008705235.1_ASM870523v1

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Seq: CP044006.1 Pseudomonas aeruginosa strain E90 chromosome, complete genome (6813135 bp)
Overview 1 RT 1: 2820242-2826164 bp 2 RT 2: 3015955-3022009 bp Neighborhood of RT #1 [2820242, 2826164] resist_ArsH KOG0389 SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf Neighborhood of RT #2 [3015955, 3022062] AAA_23 Smc RVT-UG1 COG4584 IstB_IS21 Feature: gene Location: 2820242-2820964 bp Ori: QES82427.1 Gene: arsH Feature: domain Description: resist_ArsH Location: 2820266-2820920 bp Feature: domain Description: resist_ArsH Location: 2820266-2820920 bp Feature: gene Location: 2821023-2822267 bp Feature: domain Description: KOG0389 Location: 2821041-2821158 bp Feature: domain Description: KOG0389 Location: 2821 041 -2821 1 58 bp Feature: domain Description: SF2_C_SNF Location: 2821716-2822103 bp Feature: domain Description: SF2_C_SNF Location: 2821 71 6-28221 03 bp Feature: gene Location: 2822350-2824068 bp Ori: QES82428.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2822407-2822644 bp Feature: domain Description: RVT_N Location: 2822407-2822644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822695-2823346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822695-2823346 bp Feature: domain Description: GIIM Note: maturase Location: 2823400-2823631 bp Feature: domain Description: GIIM Note: maturase Location: 2823400-2823631 bp Feature: domain Description: HNHc Note: nucleases Location: 2823865-2824021 bp Feature: domain Description: HNHc Note: nucleases Location: 2823865-2824021 bp Feature: gene Location: 2824686-2825720 bp Feature: domain Description: DEXHc_Snf Location: 2824905-2825163 bp Feature: domain Description: DEXHc_Snf Location: 2824905-28251 63 bp Feature: gene Location: 2825857-2826164 bp Feature: gene Location: 3015955-3016461 bp Feature: gene Location: 3016458-3018335 bp Ori: QES82589.1 Feature: domain Description: AAA_23 Location: 3016533-3017346 bp Feature: domain Description: AAA_23 Location: 301 6533-301 7346 bp Feature: domain Description: Smc Location: 3017523-3017835 bp Feature: domain Description: Smc Location: 301 7523-301 7835 bp Feature: gene Location: 3018416-3019753 bp Ori: QES82590.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3019040-3019517 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 301 9040-301 951 7 bp Feature: gene Location: 3019839-3021338 bp Ori: QES82591.1 Feature: domain Description: COG4584 Location: 3019893-3020661 bp Feature: domain Description: COG4584 Location: 301 9893-3020661 bp Feature: gene Location: 3021328-3022062 bp Ori: QES82592.1 Feature: domain Description: IstB_IS21 Location: 3021487-3022009 bp Feature: domain Description: IstB_IS21 Location: 3021 487-3022009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT resist_ArsH (TIGR02690), KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase ), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXHc_Snf (cd17919), AAA_23 (pfam13476), Smc (COG1196)
RVT-UG1, COG4584 (Transposase ), IstB_IS21 (pfam01695)