myRT

myRT report for GCA_008727135.1_ASM872713v1

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Seq: CP044139.1 Escherichia coli O157 strain AR-0430 plasmid pAR-0430-3, complete sequence (92728 bp)
Overview 1 RT 1: 7356-10925 bp Neighborhood of RT #1 [7356, 10925] DUF1281 DUF1281_C RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 7356-7661 bp Feature: gene Location: 7665-8567 bp Feature: domain Description: DUF1281 Location: 7734-8262 bp Feature: domain Description: DUF1 281 Location: 7734-8262 bp Feature: domain Description: DUF1281_C Location: 8268-8496 bp Feature: domain Description: DUF1 281 _C Location: 8268-8496 bp Feature: gene Location: 8644-9567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8656-8836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8656-8836 bp Feature: domain Description: GIIM Note: maturase Location: 8890-9121 bp Feature: domain Description: GIIM Note: maturase Location: 8890-91 21 bp Feature: domain Description: HNHc Note: nucleases Location: 9352-9511 bp Feature: domain Description: HNHc Note: nucleases Location: 9352-951 1 bp Feature: gene Location: 9764-10366 bp Feature: domain Description: RVT_N Location: 9821-10058 bp Feature: domain Description: RVT_N Location: 9821 -1 0058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10109-10325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 09-1 0325 bp Feature: gene Location: 10407-10547 bp Feature: gene Location: 10629-10925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)