myRT

myRT report for GCA_008728455.1_ASM872845v1

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Seq: CP044264.1 Enterococcus faecium strain V1836 chromosome, complete genome (2884831 bp)
Overview 1 RT 1: 735308-740324 bp 2 RT 2: 878189-882993 bp Neighborhood of RT #1 [735308, 740324] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Neighborhood of RT #2 [878189, 883007] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 735308-735805 bp Ori: QEW97752.1 Feature: domain Description: ArdA Location: 735326-735791 bp Feature: domain Description: ArdA Location: 735326-735791 bp Feature: gene Location: 735922-736146 bp Feature: gene Location: 736250-738160 bp Ori: QEW97754.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736583-737321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736583-737321 bp Feature: domain Description: HNHc Note: nucleases Location: 737876-738041 bp Feature: domain Description: HNHc Note: nucleases Location: 737876-738041 bp Feature: gene Location: 738944-740149 bp Ori: QEW97755.1 Feature: domain Description: HTH_XRE Location: 738989-739133 bp Feature: domain Description: HTH_XRE Location: 738989-7391 33 bp Feature: domain Description: Rol_Rep_N Location: 739160-739427 bp Feature: domain Description: Rol_Rep_N Location: 7391 60-739427 bp Feature: domain Description: Rep_trans Location: 739451-740060 bp Feature: domain Description: Rep_trans Location: 739451 -740060 bp Feature: gene Location: 740172-740324 bp Feature: gene Location: 878189-879373 bp Ori: QEW97877.1 Feature: domain Description: HTH_XRE Location: 878219-878363 bp Feature: domain Description: HTH_XRE Location: 87821 9-878363 bp Feature: domain Description: Rol_Rep_N Location: 878396-878660 bp Feature: domain Description: Rol_Rep_N Location: 878396-878660 bp Feature: domain Description: Rep_trans Location: 878684-879296 bp Feature: domain Description: Rep_trans Location: 878684-879296 bp Feature: gene Location: 879370-879507 bp Ori: QEW97878.1 Feature: domain Description: DUF3789 Location: 879397-879490 bp Feature: domain Description: DUF3789 Location: 879397-879490 bp Feature: gene Location: 880253-882163 bp Ori: QEW97879.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880586-881324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880586-881 324 bp Feature: domain Description: HNHc Note: nucleases Location: 881879-882044 bp Feature: domain Description: HNHc Note: nucleases Location: 881 879-882044 bp Feature: gene Location: 882267-882491 bp Feature: gene Location: 882504-883007 bp Ori: QEW97880.1 Feature: domain Description: ArdA Location: 882522-882993 bp Feature: domain Description: ArdA Location: 882522-882993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664)

Seq: CP044266.1 Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence (147595 bp)
Overview 1 RT 1: 13043-19175 bp Neighborhood of RT #1 [13043, 19180] Rve HsdM RVT-AbiP2 Tra8 PinE Feature: gene Location: 13043-13729 bp Ori: QEW99962.1 Feature: domain Description: Rve Location: 13052-13700 bp Feature: domain Description: Rve Location: 13052 -13700 bp Feature: gene Location: 13785-15230 bp Feature: domain Description: HsdM Location: 13806-15231 bp Feature: domain Description: HsdM Location: 13806-152 31 bp Feature: gene Location: 15568-17043 bp Ori: QEW99963.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15916-16381 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15916-16381 bp Feature: gene Location: 17021-17974 bp Ori: QEW99964.1 Feature: domain Description: Tra8 Location: 17024-17951 bp Feature: domain Description: Tra8 Location: 1702 4-17951 bp Feature: gene Location: 18617-19180 bp Ori: QEW99965.1 Feature: domain Description: PinE Location: 18629-19175 bp Feature: domain Description: PinE Location: 1862 9-19175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826), PinE (COG1961)