myRT

myRT report for GCA_008761455.2_ASM876145v2

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Seq: CP051653.1 Escherichia coli strain RM13752 plasmid pRM13752 (99009 bp)
Overview 1 RT 1: 9538-14159 bp 2 RT 2: 90829-94129 bp Neighborhood of RT #1 [9538, 14329] HTH_38 Tra8 HTH_28 RVT-GII GIIM PHA02517 DUF1380 Neighborhood of RT #2 [90829, 94140] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9538-10690 bp Feature: domain Description: HTH_38 Location: 9547-9661 bp Feature: domain Description: HTH_38 Location: 9547-9661 bp Feature: domain Description: Tra8 Location: 9697-10003 bp Feature: domain Description: Tra8 Location: 9697-1 0003 bp Feature: gene Location: 10755-11179 bp Feature: domain Description: HTH_28 Location: 10782-10890 bp Feature: domain Description: HTH_28 Location: 1 0782-1 0890 bp Feature: gene Location: 11852-13360 bp Ori: QJQ52699.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12110-12842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 1 0-1 2842 bp Feature: domain Description: GIIM Note: maturase Location: 12917-13115 bp Feature: domain Description: GIIM Note: maturase Location: 1 291 7-1 31 1 5 bp Feature: gene Location: 13441-13929 bp Feature: domain Description: PHA02517 Location: 13444-13900 bp Feature: domain Description: PHA0251 7 Location: 1 3444-1 3900 bp Feature: gene Location: 13922-14329 bp Ori: QJQ52626.1 Feature: domain Description: DUF1380 Location: 13925-14159 bp Feature: domain Description: DUF1 380 Location: 1 3925-1 41 59 bp Feature: gene Location: 90829-91536 bp Feature: domain Description: InsE Location: 90871-91108 bp Feature: domain Description: InsE Location: 90871 -91 1 08 bp Feature: domain Description: PHA02517 Location: 91219-91537 bp Feature: domain Description: PHA0251 7 Location: 91 21 9-91 537 bp Feature: gene Location: 92212-92567 bp Feature: gene Location: 92539-93240 bp Ori: QJQ52697.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92545-93100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92545-931 00 bp Feature: gene Location: 93213-93598 bp Feature: domain Description: GIIM Note: maturase Location: 93228-93378 bp Feature: domain Description: GIIM Note: maturase Location: 93228-93378 bp Feature: gene Location: 93679-94140 bp Feature: domain Description: PHA02517 Location: 93682-94129 bp Feature: domain Description: PHA0251 7 Location: 93682-941 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), HTH_28 (pfam13518), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF1380 (pfam07128), InsE (COG2963)

Seq: CP044311.1 Escherichia coli strain RM13752 chromosome, complete genome (5264517 bp)
Overview 1 RT 1: 2558600-2563367 bp Neighborhood of RT #1 [2558600, 2563532] YbdN InsE RVT-GII Lambda_Bor Phage_lysis Feature: gene Location: 2558600-2559829 bp Ori: QEX54493.1 Feature: domain Description: YbdN Location: 2558621-2559821 bp Feature: domain Description: YbdN Location: 2 55862 1-2 55982 1 bp Feature: gene Location: 2560196-2560928 bp Feature: domain Description: InsE Location: 2560235-2560502 bp Feature: domain Description: InsE Location: 2 5602 35-2 560502 bp Feature: gene Location: 2561600-2561950 bp Ori: QEX54495.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2561858-2561927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 561858-2 56192 7 bp Feature: gene Location: 2562973-2563266 bp Ori: QEX54497.1 Gene: iss Feature: domain Description: Lambda_Bor Location: 2563030-2563258 bp Feature: domain Description: Lambda_Bor Location: 2 563030-2 5632 58 bp Feature: gene Location: 2563298-2563532 bp Feature: domain Description: Phage_lysis Location: 2563301-2563367 bp Feature: domain Description: Phage_lysis Location: 2 563301-2 563367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbdN (COG3969), InsE (COG2963), RVT-GII, Lambda_Bor (pfam06291), Phage_lysis (pfam03245)