myRT

myRT report for GCA_008761475.2_ASM876147v2

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Seq: CP051654.1 Escherichia coli strain RM13745 plasmid pRM13745-1 (45063 bp)
Overview 1 RT 1: 22749-27370 bp Neighborhood of RT #1 [22749, 27540] HTH_38 Tra8 HTH_28 RVT-GII GIIM PHA02517 DUF1380 Feature: gene Location: 22749-23901 bp Feature: domain Description: HTH_38 Location: 22758-22872 bp Feature: domain Description: HTH_38 Location: 22758-22872 bp Feature: domain Description: Tra8 Location: 22908-23214 bp Feature: domain Description: Tra8 Location: 22908-2321 4 bp Feature: gene Location: 23966-24390 bp Feature: domain Description: HTH_28 Location: 23993-24101 bp Feature: domain Description: HTH_28 Location: 23993-241 01 bp Feature: gene Location: 25063-26571 bp Ori: QJQ71363.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25321-26053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25321 -26053 bp Feature: domain Description: GIIM Note: maturase Location: 26128-26326 bp Feature: domain Description: GIIM Note: maturase Location: 261 28-26326 bp Feature: gene Location: 26652-27140 bp Feature: domain Description: PHA02517 Location: 26655-27111 bp Feature: domain Description: PHA0251 7 Location: 26655-271 1 1 bp Feature: gene Location: 27133-27540 bp Ori: QJQ71342.1 Feature: domain Description: DUF1380 Location: 27136-27370 bp Feature: domain Description: DUF1 380 Location: 271 36-27370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), HTH_28 (pfam13518), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF1380 (pfam07128)

Seq: CP044312.1 Escherichia coli strain RM13745 chromosome, complete genome (5264698 bp)
Overview 1 RT 1: 3310568-3315335 bp Neighborhood of RT #1 [3310568, 3315500] YbdN InsE RVT-GII Lambda_Bor Phage_lysis Feature: gene Location: 3310568-3311797 bp Ori: QEX60099.1 Feature: domain Description: YbdN Location: 3310589-3311789 bp Feature: domain Description: YbdN Location: 3310589-3311789 bp Feature: gene Location: 3312164-3312896 bp Feature: domain Description: InsE Location: 3312203-3312470 bp Feature: domain Description: InsE Location: 3312 2 03-3312 470 bp Feature: gene Location: 3313568-3313918 bp Ori: QEX60101.2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3313826-3313895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331382 6-3313895 bp Feature: gene Location: 3314941-3315234 bp Ori: QEX60103.1 Gene: iss Feature: domain Description: Lambda_Bor Location: 3314998-3315226 bp Feature: domain Description: Lambda_Bor Location: 3314998-33152 2 6 bp Feature: gene Location: 3315266-3315500 bp Feature: domain Description: Phage_lysis Location: 3315269-3315335 bp Feature: domain Description: Phage_lysis Location: 33152 69-3315335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbdN (COG3969), InsE (COG2963), RVT-GII, Lambda_Bor (pfam06291), Phage_lysis (pfam03245)