myRT

myRT report for GCA_008761495.2_ASM876149v2

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Seq: CP044313.1 Escherichia coli strain RM11911 chromosome, complete genome (5310338 bp)
Overview 1 RT 1: 1728910-1730828 bp Neighborhood of RT #1 [1728910, 1730828] RVT-GII Feature: gene Location: 1728910-1729092 bp Feature: gene Location: 1729276-1729647 bp Feature: gene Location: 1729940-1730305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1730213-1730282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 73021 3-1 730282 bp Feature: gene Location: 1730331-1730459 bp Feature: gene Location: 1730580-1730828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CP051656.1 Escherichia coli strain RM11911 plasmid pRM11911 (175089 bp)
Overview 1 RT 1: 75471-77974 bp 2 RT 2: 138951-142303 bp Neighborhood of RT #1 [75471, 77985] YkfC RVT-GII PHA02517 Neighborhood of RT #2 [138951, 142473] PHA02517 RVT-GII GIIM DUF1380 Feature: gene Location: 75471-75626 bp Feature: gene Location: 76032-76412 bp Feature: domain Description: YkfC Location: 76092-76362 bp Feature: domain Description: YkfC Location: 76092 -76362 bp Feature: gene Location: 76384-77085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76390-76945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76390-76945 bp Feature: gene Location: 77265-77423 bp Feature: gene Location: 77566-77985 bp Feature: domain Description: PHA02517 Location: 77569-77974 bp Feature: domain Description: PHA02 517 Location: 77569-77974 bp Feature: gene Location: 138951-139124 bp Feature: gene Location: 139126-139389 bp Feature: domain Description: PHA02517 Location: 139129-139324 bp Feature: domain Description: PHA02 517 Location: 13912 9-13932 4 bp Feature: gene Location: 139981-141504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140254-140986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402 54-140986 bp Feature: domain Description: GIIM Note: maturase Location: 141061-141259 bp Feature: domain Description: GIIM Note: maturase Location: 141061-1412 59 bp Feature: gene Location: 141672-141995 bp Feature: gene Location: 142066-142473 bp Feature: domain Description: DUF1380 Location: 142069-142303 bp Feature: domain Description: DUF1380 Location: 142 069-142 303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), DUF1380 (pfam07128)