myRT

myRT report for GCA_008807035.1_ASM880703v1

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Seq: CP031739.1 Psychrobacillus sp. AK 1817 chromosome, complete genome (4096020 bp)
Overview 1 RT 1: 281582-286064 bp 2 RT 2: 1770448-1776105 bp 3 RT 3: 1789461-1794178 bp 4 RT 4: 3889356-3894885 bp Neighborhood of RT #1 [281582, 286183] RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Neighborhood of RT #2 [1770448, 1776105] HK_WalK HK_WalK OmpR RVT-GII GIIM HAD_5NT Neighborhood of RT #3 [1789461, 1794210] DEDD_Tnp_IS110 COG3547 YdeE RVT-GII GIIM VOC_like Neighborhood of RT #4 [3889356, 3894899] COG3607 RVT-GII GIIM PBP2_Ngo0372_TcyA PRK15100 Feature: gene Location: 281582-282082 bp Feature: gene Location: 282139-282399 bp Feature: gene Location: 282914-284242 bp Ori: QEY19466.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283169-283862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2831 69-283862 bp Feature: domain Description: GIIM Note: maturase Location: 283952-284150 bp Feature: domain Description: GIIM Note: maturase Location: 283952-2841 50 bp Feature: gene Location: 284429-284704 bp Feature: gene Location: 284981-286183 bp Ori: QEY19468.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 284996-285470 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 284996-285470 bp Feature: domain Description: Transposase_20 Location: 285803-286064 bp Feature: domain Description: Transposase_20 Location: 285803-286064 bp Feature: gene Location: 1770448-1772199 bp Ori: QEY20799.1 Feature: domain Description: HK_WalK Location: 1771084-1771480 bp Feature: domain Description: HK_WalK Location: 1 771 084-1 771 480 bp Feature: domain Description: HK_WalK Location: 1771489-1772170 bp Feature: domain Description: HK_WalK Location: 1 771 489-1 7721 70 bp Feature: gene Location: 1772196-1772876 bp Ori: QEY22954.1 Feature: domain Description: OmpR Location: 1772208-1772865 bp Feature: domain Description: OmpR Location: 1 772208-1 772865 bp Feature: gene Location: 1773338-1774666 bp Ori: QEY20800.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773593-1774286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 773593-1 774286 bp Feature: domain Description: GIIM Note: maturase Location: 1774376-1774574 bp Feature: domain Description: GIIM Note: maturase Location: 1 774376-1 774574 bp Feature: gene Location: 1775204-1775569 bp Feature: domain Description: HAD_5NT Location: 1775213-1775546 bp Feature: domain Description: HAD_5NT Location: 1 77521 3-1 775546 bp Feature: gene Location: 1775734-1776105 bp Feature: gene Location: 1789461-1790696 bp Ori: QEY20811.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 1789476-1789950 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 789476-1 789950 bp Feature: domain Description: COG3547 Location: 1790187-1790511 bp Feature: domain Description: COG3547 Location: 1 7901 87-1 79051 1 bp Feature: gene Location: 1790911-1791306 bp Ori: QEY20812.1 Feature: domain Description: YdeE Location: 1790941-1791301 bp Feature: domain Description: YdeE Location: 1 790941 -1 791 301 bp Feature: gene Location: 1791484-1792812 bp Ori: QEY20813.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1791739-1792432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 791 739-1 792432 bp Feature: domain Description: GIIM Note: maturase Location: 1792522-1792720 bp Feature: domain Description: GIIM Note: maturase Location: 1 792522-1 792720 bp Feature: gene Location: 1793426-1793656 bp Feature: gene Location: 1793815-1794210 bp Ori: QEY20815.1 Feature: domain Description: VOC_like Location: 1793848-1794178 bp Feature: domain Description: VOC_like Location: 1 793848-1 7941 78 bp Feature: gene Location: 3889356-3889766 bp Ori: QEY22662.1 Feature: domain Description: COG3607 Location: 3889371-3889761 bp Feature: domain Description: COG3607 Location: 3889371 -3889761 bp Feature: gene Location: 3889974-3890399 bp Feature: gene Location: 3890926-3892254 bp Ori: QEY22664.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3891181-3891874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3891 1 81 -3891 874 bp Feature: domain Description: GIIM Note: maturase Location: 3891964-3892162 bp Feature: domain Description: GIIM Note: maturase Location: 3891 964-38921 62 bp Feature: gene Location: 3893393-3894223 bp Ori: QEY22665.1 Feature: domain Description: PBP2_Ngo0372_TcyA Location: 3893555-3894215 bp Feature: domain Description: PBP2_Ngo0372_TcyA Location: 3893555-389421 5 bp Feature: gene Location: 3894210-3894899 bp Ori: QEY22666.1 Feature: domain Description: PRK15100 Location: 3894249-3894885 bp Feature: domain Description: PRK1 51 00 Location: 3894249-3894885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), HK_WalK (NF033092), OmpR (COG0745), HAD_5NT (cd07504), COG3547 (Transposase ), YdeE (COG3708), VOC_like (cd16355)
COG3607 (Predicted lactoylglutathione lyase ), PBP2_Ngo0372_TcyA (cd13711), PRK15100 (cystine ABC transporter permease)