myRT

myRT report for GCA_008807135.1_ASM880713v1

Download annotations/find similar RTs

Seq: CP041448.1 Escherichia coli strain YPE10 chromosome, complete genome (4860533 bp)
Overview 1 RT 1: 1846056-1849926 bp Neighborhood of RT #1 [1846056, 1849926] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 1846056-1846795 bp Feature: domain Description: InsE Location: 1846059-1846395 bp Feature: domain Description: InsE Location: 1 846059-1 846395 bp Feature: gene Location: 1846788-1847159 bp Feature: gene Location: 1847453-1848976 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1847726-1848458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 847726-1 848458 bp Feature: domain Description: GIIM Note: maturase Location: 1848533-1848731 bp Feature: domain Description: GIIM Note: maturase Location: 1 848533-1 848731 bp Feature: gene Location: 1849057-1849545 bp Feature: domain Description: PHA02517 Location: 1849060-1849534 bp Feature: domain Description: PHA0251 7 Location: 1 849060-1 849534 bp Feature: gene Location: 1849720-1849926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP041444.1 Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence (78706 bp)
Overview 1 RT 1: 61841-65294 bp Neighborhood of RT #1 [61841, 65332] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 61841-62272 bp Ori: QEY40711.1 Gene: umuD Feature: domain Description: PRK10276 Location: 61892-62255 bp Feature: domain Description: PRK102 76 Location: 61892 -62 2 55 bp Feature: gene Location: 62430-62681 bp Feature: gene Location: 62681-64165 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63083-63773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63083-63773 bp Feature: gene Location: 64317-65014 bp Feature: domain Description: Zn_Tnp_IS1 Location: 64323-64425 bp Feature: domain Description: Zn_Tnp_IS1 Location: 6432 3-6442 5 bp Feature: domain Description: HTH_Tnp_IS1 Location: 64446-64578 bp Feature: domain Description: HTH_Tnp_IS1 Location: 64446-64578 bp Feature: gene Location: 65024-65332 bp Feature: domain Description: Rep_3 Location: 65030-65294 bp Feature: domain Description: Rep_3 Location: 65030-652 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)