myRT

myRT report for GCA_008807315.1_ASM880731v1

Download annotations/find similar RTs

Seq: CP042254.1 Legionella longbeachae strain B3526CHC chromosome, complete genome (4199426 bp)
Overview 1 RT 1: 27644-32367 bp 2 RT 2: 2135300-2145128 bp 3 RT 3: 2683669-2687452 bp 4 RT 4: 3538284-3543184 bp 5 RT 5: 4113587-4120531 bp Neighborhood of RT #1 [27644, 32378] Rve YciA RVT_N RVT-GII GIIM PRK11768 Neighborhood of RT #2 [2135300, 2145139] RVT-UG18 LDT_IgD_like_2 YfaS Neighborhood of RT #3 [2683669, 2687499] RVT-UG18 RND_mfp HlyD_3 PRK11556 Neighborhood of RT #4 [3538284, 3544014] RVT-AbiP2 DUF5338 DUF927 Neighborhood of RT #5 [4113587, 4120531] PRK10060 RVT-UNC CAP_ED CPBP Feature: gene Location: 27644-28354 bp Feature: domain Description: Rve Location: 27677-28289 bp Feature: domain Description: Rve Location: 27677-28289 bp Feature: gene Location: 28685-29074 bp Ori: QEY49919.1 Feature: domain Description: YciA Location: 28700-29054 bp Feature: domain Description: YciA Location: 28700-29054 bp Feature: gene Location: 29767-30627 bp Ori: QEY49920.1 Feature: domain Description: RVT_N Location: 29818-30061 bp Feature: domain Description: RVT_N Location: 2981 8-30061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30106-30610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 06-3061 0 bp Feature: gene Location: 30612-31052 bp Ori: QEY53147.1 Feature: domain Description: GIIM Note: maturase Location: 30627-30861 bp Feature: domain Description: GIIM Note: maturase Location: 30627-30861 bp Feature: gene Location: 31398-32378 bp Ori: QEY49921.1 Feature: domain Description: PRK11768 Location: 31410-32367 bp Feature: domain Description: PRK1 1 768 Location: 31 41 0-32367 bp Feature: gene Location: 2135300-2136235 bp Feature: gene Location: 2136174-2136463 bp Feature: gene Location: 2136518-2137422 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2136740-2137121 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 36740-21 371 21 bp Feature: gene Location: 2137560-2138832 bp Feature: gene Location: 2139398-2145139 bp Ori: QEY51580.1 Feature: domain Description: LDT_IgD_like_2 Location: 2139770-2139881 bp Feature: domain Description: LDT_IgD_like_2 Location: 21 39770-21 39881 bp Feature: domain Description: YfaS Location: 2140175-2145128 bp Feature: domain Description: YfaS Location: 21 401 75-21 451 28 bp Feature: gene Location: 2683669-2684625 bp Feature: gene Location: 2684576-2684854 bp Feature: gene Location: 2684974-2685435 bp Ori: QEY52007.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2685196-2685412 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 26851 96-268541 2 bp Feature: gene Location: 2685935-2686117 bp Feature: gene Location: 2686297-2687499 bp Ori: QEY52009.1 Feature: domain Description: RND_mfp Location: 2686405-2686906 bp Feature: domain Description: RND_mfp Location: 2686405-2686906 bp Feature: domain Description: HlyD_3 Location: 2686921-2687209 bp Feature: domain Description: HlyD_3 Location: 2686921 -2687209 bp Feature: domain Description: PRK11556 Location: 2687260-2687452 bp Feature: domain Description: PRK1 1 556 Location: 2687260-2687452 bp Feature: gene Location: 3538284-3539066 bp Feature: gene Location: 3539380-3539685 bp Feature: gene Location: 3539702-3541225 bp Ori: QEY52682.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3540143-3540608 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35401 43-3540608 bp Feature: gene Location: 3541586-3541945 bp Feature: domain Description: DUF5338 Location: 3541595-3541802 bp Feature: domain Description: DUF5338 Location: 3541 595-3541 802 bp Feature: gene Location: 3542263-3544014 bp Ori: QEY52683.1 Feature: domain Description: DUF927 Location: 3542344-3543184 bp Feature: domain Description: DUF927 Location: 3542344-35431 84 bp Feature: gene Location: 4113587-4115233 bp Ori: QEY53305.1 Feature: domain Description: PRK10060 Location: 4113911-4115204 bp Feature: domain Description: PRK1 0060 Location: 41 1 391 1 -41 1 5204 bp Feature: gene Location: 4115259-4115735 bp Feature: gene Location: 4116052-4117371 bp Ori: QEY53307.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 4116223-4116859 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 41 1 6223-41 1 6859 bp Feature: gene Location: 4117346-4118458 bp Ori: QEY53092.1 Feature: domain Description: CAP_ED Location: 4117385-4117685 bp Feature: domain Description: CAP_ED Location: 41 1 7385-41 1 7685 bp Feature: domain Description: CPBP Location: 4118165-4118411 bp Feature: domain Description: CPBP Location: 41 1 81 65-41 1 841 1 bp Feature: gene Location: 4118471-4120531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), YciA (COG1607), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK11768 (serine/threonine protein kinase), RVT-UG18, LDT_IgD_like_2 (cd13432), YfaS (COG2373), RND_mfp (TIGR01730)
HlyD_3 (pfam13437), PRK11556 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit), RVT-AbiP2, DUF5338 (pfam17273), DUF927 (pfam06048), PRK10060 (cyclic di-GMP phosphodiesterase), RVT-DGRs/RVT-UG26/RVT-CRISPR/RVT-UG27(RVT-UNC), CAP_ED (cl00047), CPBP