myRT

myRT report for GCA_008808035.1_ASM880803v1

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Seq: CP043857.1 Arcobacter cibarius strain H743 chromosome, complete genome (2105974 bp)
Overview 1 RT 1: 1972429-1978874 bp Neighborhood of RT #1 [1972429, 1980745] PHA02517 InsE RVT_N RVT-GII GIIM PIN_12 SSL2 Feature: gene Location: 1972429-1973253 bp Ori: QEZ90072.1 Feature: domain Description: PHA02517 Location: 1972432-1973230 bp Feature: domain Description: PHA0251 7 Location: 1 972432-1 973230 bp Feature: gene Location: 1973313-1973597 bp Ori: QEZ90073.1 Feature: domain Description: InsE Location: 1973322-1973586 bp Feature: domain Description: InsE Location: 1 973322-1 973586 bp Feature: gene Location: 1974109-1975623 bp Ori: QEZ90074.1 Feature: domain Description: RVT_N Location: 1974202-1974445 bp Feature: domain Description: RVT_N Location: 1 974202-1 974445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974496-1975156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 974496-1 9751 56 bp Feature: domain Description: GIIM Note: maturase Location: 1975210-1975441 bp Feature: domain Description: GIIM Note: maturase Location: 1 97521 0-1 975441 bp Feature: gene Location: 1976342-1977403 bp Ori: QEZ90075.1 Feature: domain Description: PIN_12 Location: 1976357-1976846 bp Feature: domain Description: PIN_1 2 Location: 1 976357-1 976846 bp Feature: gene Location: 1977560-1980745 bp Ori: QEZ90076.1 Feature: domain Description: SSL2 Location: 1977878-1978874 bp Feature: domain Description: SSL2 Location: 1 977878-1 978874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PIN_12, SSL2 (COG1061)

Seq: CP043858.1 Arcobacter cibarius strain H743 plasmid pACIB, complete sequence (237519 bp)
Overview 1 RT 1: 128673-145745 bp Neighborhood of RT #1 [128673, 145745] DUF262 DUF1524 RecB RecB RVT_N RVT-GII GIIM DUF4158 DDE_Tnp_Tn3 PinE DUF4885 RVT_N RVT-GII GIIM Feature: gene Location: 128673-130565 bp Ori: QEZ90296.1 Feature: domain Description: DUF262 Location: 128709-129282 bp Feature: domain Description: DUF2 62 Location: 12 8709-12 92 82 bp Feature: domain Description: DUF1524 Location: 130194-130542 bp Feature: domain Description: DUF152 4 Location: 130194-130542 bp Feature: gene Location: 130555-133686 bp Ori: QEZ90297.1 Feature: domain Description: RecB Location: 130570-133060 bp Feature: domain Description: RecB Location: 130570-133060 bp Feature: domain Description: RecB Location: 133294-133645 bp Feature: domain Description: RecB Location: 1332 94-133645 bp Feature: gene Location: 133891-135405 bp Ori: QEZ90298.1 Feature: domain Description: RVT_N Location: 133984-134227 bp Feature: domain Description: RVT_N Location: 133984-1342 2 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134278-134938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1342 78-134938 bp Feature: domain Description: GIIM Note: maturase Location: 134992-135223 bp Feature: domain Description: GIIM Note: maturase Location: 134992 -1352 2 3 bp Feature: gene Location: 136109-139108 bp Ori: QEZ90299.1 Feature: domain Description: DUF4158 Location: 136127-136604 bp Feature: domain Description: DUF4158 Location: 13612 7-136604 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 137876-139064 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 137876-139064 bp Feature: gene Location: 139269-139880 bp Ori: QEZ90300.1 Feature: domain Description: PinE Location: 139272-139839 bp Feature: domain Description: PinE Location: 1392 72 -139839 bp Feature: gene Location: 139908-140450 bp Feature: gene Location: 141473-142822 bp Ori: QEZ90302.1 Feature: domain Description: DUF4885 Location: 141632-142583 bp Feature: domain Description: DUF4885 Location: 141632 -142 583 bp Feature: gene Location: 143492-145000 bp Ori: QEZ90303.1 Feature: domain Description: RVT_N Location: 143579-143822 bp Feature: domain Description: RVT_N Location: 143579-14382 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143873-144533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143873-144533 bp Feature: domain Description: GIIM Note: maturase Location: 144587-144818 bp Feature: domain Description: GIIM Note: maturase Location: 144587-144818 bp Feature: gene Location: 144936-145397 bp Feature: gene Location: 145404-145745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), DUF1524 (pfam07510), RecB (COG4998), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), PinE (COG1961), DUF4885 (pfam16226)