myRT

myRT report for GCA_008876665.1_ASM887666v1

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Seq: CP044534.1 Lactobacillus frumenti strain LF145 chromosome, complete genome (1752928 bp)
Overview 1 RT 1: 493373-498222 bp 2 RT 2: 507482-513678 bp Neighborhood of RT #1 [493373, 498248] Tra8 RVT-GII GIIM PRK09564 Neighborhood of RT #2 [507482, 513836] RMtype1_S_Lla161ORF747P_TRD1-CR1_like COG0610 RVT-GII GIIM Mrr_N Mrr_N Feature: gene Location: 493373-494296 bp Ori: QFG72248.1 Feature: domain Description: Tra8 Location: 493382-494285 bp Feature: domain Description: Tra8 Location: 493382-494285 bp Feature: gene Location: 494516-494848 bp Feature: gene Location: 494924-496306 bp Ori: QFG72250.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495242-495860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495242-495860 bp Feature: domain Description: GIIM Note: maturase Location: 495914-496142 bp Feature: domain Description: GIIM Note: maturase Location: 49591 4-4961 42 bp Feature: gene Location: 496349-496495 bp Feature: gene Location: 496884-498248 bp Ori: QFG72251.1 Feature: domain Description: PRK09564 Location: 496899-498222 bp Feature: domain Description: PRK09564 Location: 496899-498222 bp Feature: gene Location: 507482-507640 bp Ori: QFG72259.1 Feature: domain Description: RMtype1_S_Lla161ORF747P_TRD1-CR1_like Location: 507488-507635 bp Feature: domain Description: RMtype1 _S_Lla1 61 ORF747P_TRD1 -CR1 _like Location: 507488-507635 bp Feature: gene Location: 507902-510916 bp Ori: QFG72260.1 Feature: domain Description: COG0610 Location: 507911-510755 bp Feature: domain Description: COG061 0 Location: 50791 1 -51 0755 bp Feature: gene Location: 511462-512847 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512119-512401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 21 1 9-51 2401 bp Feature: domain Description: GIIM Note: maturase Location: 512455-512683 bp Feature: domain Description: GIIM Note: maturase Location: 51 2455-51 2683 bp Feature: gene Location: 513001-513372 bp Ori: QFG72261.1 Feature: domain Description: Mrr_N Location: 513049-513292 bp Feature: domain Description: Mrr_N Location: 51 3049-51 3292 bp Feature: gene Location: 513369-513836 bp Feature: domain Description: Mrr_N Location: 513423-513678 bp Feature: domain Description: Mrr_N Location: 51 3423-51 3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-GII, GIIM (pfam08388), PRK09564 (coenzyme A disulfide reductase; Reviewed), RMtype1_S_Lla161ORF747P_TRD1-CR1_like (cd17286), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), Mrr_N (pfam14338)