myRT

myRT report for GCA_008926145.1_ASM892614v1

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Seq: CP032798.1 Escherichia coli strain ERL06-2497 plasmid pERL06-2497-1, complete sequence (92743 bp)
Overview 1 RT 1: 55908-59479 bp Neighborhood of RT #1 [55908, 59479] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55908-56204 bp Feature: gene Location: 56231-56445 bp Feature: gene Location: 56467-58191 bp Ori: QFH06795.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56524-56761 bp Feature: domain Description: RVT_N Location: 56524-56761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56812-57460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5681 2-57460 bp Feature: domain Description: YkfC Location: 57592-57748 bp Feature: domain Description: YkfC Location: 57592-57748 bp Feature: domain Description: HNHc Note: nucleases Location: 57976-58135 bp Feature: domain Description: HNHc Note: nucleases Location: 57976-581 35 bp Feature: gene Location: 58268-59170 bp Ori: QFH06796.1 Feature: domain Description: DUF1281 Location: 58337-58865 bp Feature: domain Description: DUF1 281 Location: 58337-58865 bp Feature: domain Description: DUF1281_C Location: 58871-59099 bp Feature: domain Description: DUF1 281 _C Location: 58871 -59099 bp Feature: gene Location: 59174-59479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP032797.1 Escherichia coli strain ERL06-2497 chromosome, complete genome (5504769 bp)
Overview 1 RT 1: 2204568-2207788 bp Neighborhood of RT #1 [2204568, 2207788] Minor_tail_Z Phage_tail_U RVT_N RVT-GII YkfC HNHc Feature: gene Location: 2204568-2205146 bp Ori: QFH03519.1 Feature: domain Description: Minor_tail_Z Location: 2204577-2205144 bp Feature: domain Description: Minor_tail_Z Location: 2 2 04577-2 2 05144 bp Feature: gene Location: 2205143-2205472 bp Ori: QFH03520.1 Feature: domain Description: Phage_tail_U Location: 2205146-2205434 bp Feature: domain Description: Phage_tail_U Location: 2 2 05146-2 2 05434 bp Feature: gene Location: 2205505-2207229 bp Ori: QFH03521.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2205562-2205799 bp Feature: domain Description: RVT_N Location: 2 2 05562 -2 2 05799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205850-2206498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 05850-2 2 06498 bp Feature: domain Description: YkfC Location: 2206630-2206786 bp Feature: domain Description: YkfC Location: 2 2 06630-2 2 06786 bp Feature: domain Description: HNHc Note: nucleases Location: 2207014-2207173 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 07014-2 2 07173 bp Feature: gene Location: 2207251-2207465 bp Feature: gene Location: 2207492-2207788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Minor_tail_Z (pfam06763), Phage_tail_U (pfam06141), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)