myRT

myRT report for GCA_008926305.1_ASM892630v1

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Seq: CP032806.1 Escherichia coli strain ERL05-0623 plasmid pERL05-0623-1, complete sequence (92785 bp)
Overview 1 RT 1: 55901-59472 bp Neighborhood of RT #1 [55901, 59472] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55901-56197 bp Feature: gene Location: 56224-56438 bp Feature: gene Location: 56460-58184 bp Ori: QFH23002.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56517-56754 bp Feature: domain Description: RVT_N Location: 5651 7-56754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56805-57453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56805-57453 bp Feature: domain Description: YkfC Location: 57585-57741 bp Feature: domain Description: YkfC Location: 57585-57741 bp Feature: domain Description: HNHc Note: nucleases Location: 57969-58128 bp Feature: domain Description: HNHc Note: nucleases Location: 57969-581 28 bp Feature: gene Location: 58261-59163 bp Ori: QFH23003.1 Feature: domain Description: DUF1281 Location: 58330-58858 bp Feature: domain Description: DUF1 281 Location: 58330-58858 bp Feature: domain Description: DUF1281_C Location: 58864-59092 bp Feature: domain Description: DUF1 281 _C Location: 58864-59092 bp Feature: gene Location: 59167-59472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP032805.1 Escherichia coli strain ERL05-0623 chromosome, complete genome (5390258 bp)
Overview 1 RT 1: 3009768-3012986 bp Neighborhood of RT #1 [3009768, 3012988] RVT_N RVT-GII YkfC HNHc Phage_tail_U Minor_tail_Z Feature: gene Location: 3009768-3010064 bp Feature: gene Location: 3010091-3010305 bp Feature: gene Location: 3010327-3012051 bp Ori: QFH20584.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3010384-3010621 bp Feature: domain Description: RVT_N Location: 3010384-301062 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3010672-3011320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3010672 -301132 0 bp Feature: domain Description: YkfC Location: 3011452-3011608 bp Feature: domain Description: YkfC Location: 3011452 -3011608 bp Feature: domain Description: HNHc Note: nucleases Location: 3011836-3011995 bp Feature: domain Description: HNHc Note: nucleases Location: 3011836-3011995 bp Feature: gene Location: 3012084-3012413 bp Ori: QFH20585.1 Feature: domain Description: Phage_tail_U Location: 3012087-3012375 bp Feature: domain Description: Phage_tail_U Location: 3012 087-3012 375 bp Feature: gene Location: 3012410-3012988 bp Ori: QFH20586.1 Feature: domain Description: Minor_tail_Z Location: 3012419-3012986 bp Feature: domain Description: Minor_tail_Z Location: 3012 419-3012 986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), Phage_tail_U (pfam06141), Minor_tail_Z (pfam06763)