myRT

myRT report for GCA_008931345.1_ASM893134v1

Download annotations/find similar RTs

Seq: CP042481.1 Klebsiella pneumoniae strain C51 chromosome, complete genome (5222468 bp)
Overview 1 RT 1: 115359-119633 bp Neighborhood of RT #1 [115359, 119653] PRK10354 Uup RVT-GII PRK09759 Feature: gene Location: 115359-115571 bp Ori: QFH38675.1 Gene: cspA Feature: domain Description: PRK10354 Location: 115362-115569 bp Feature: domain Description: PRK1 0354 Location: 1 1 5362-1 1 5569 bp Feature: gene Location: 115670-117289 bp Ori: QFH38676.1 Feature: domain Description: Uup Location: 115706-117254 bp Feature: domain Description: Uup Location: 1 1 5706-1 1 7254 bp Feature: gene Location: 117651-119135 bp Ori: QFH43243.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118053-118743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8053-1 1 8743 bp Feature: gene Location: 119193-119387 bp Feature: gene Location: 119483-119653 bp Ori: QFH38678.1 Gene: hokA Feature: domain Description: PRK09759 Location: 119486-119633 bp Feature: domain Description: PRK09759 Location: 1 1 9486-1 1 9633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10354 (RNA chaperone/antiterminator CspA), Uup (COG0488), RVT-GII, PRK09759 (type I toxin-antitoxin system toxin HokA)

Seq: CP042482.1 Klebsiella pneumoniae strain C51 plasmid pC51_001, complete sequence (216942 bp)
Overview 1 RT 1: 202306-206166 bp Neighborhood of RT #1 [202306, 206166] HHA RVT-GII INT_Cre_C Feature: gene Location: 202306-202560 bp Ori: QFH43633.1 Feature: domain Description: HHA Location: 202357-202540 bp Feature: domain Description: HHA Location: 2 02 357-2 02 540 bp Feature: gene Location: 202825-203019 bp Feature: gene Location: 203077-204561 bp Ori: QFH43658.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203479-204169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 03479-2 04169 bp Feature: gene Location: 204647-205783 bp Ori: QFH43635.1 Feature: domain Description: INT_Cre_C Location: 205070-205724 bp Feature: domain Description: INT_Cre_C Location: 2 05070-2 0572 4 bp Feature: gene Location: 205849-206166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)