myRT

myRT report for GCA_008931525.1_ASM893152v1

Download annotations/find similar RTs

Seq: CP042571.1 Enterobacter hormaechei strain E5 chromosome, complete genome (4841070 bp)
Overview 1 RT 1: 439215-442425 bp 2 RT 2: 1032308-1036795 bp 3 RT 3: 1068488-1072392 bp 4 RT 4: 2395662-2398833 bp 5 RT 5: 3543556-3547273 bp 6 RT 6: 4002104-4005281 bp 7 RT 7: 4025498-4029979 bp 8 RT 8: 4553796-4558874 bp Neighborhood of RT #1 [439215, 442819] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [1032308, 1037204] phage_term_2 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #3 [1068488, 1072801] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #4 [2395662, 2399242] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #5 [3543556, 3547275] InsE RVT-GII GIIM PHA02517 PRK09678 Neighborhood of RT #6 [4002104, 4005690] Sigma70_r4 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #7 [4025498, 4030388] PFDH_like PHA02517 RVT-GII GIIM InsE Neighborhood of RT #8 [4553796, 4559283] DUF903 DUF903 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 439215-439454 bp Feature: gene Location: 439381-439869 bp Feature: domain Description: PHA02517 Location: 439384-439858 bp Feature: domain Description: PHA0251 7 Location: 439384-439858 bp Feature: gene Location: 439950-441458 bp Ori: QFH87638.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440208-440940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440208-440940 bp Feature: domain Description: GIIM Note: maturase Location: 441015-441213 bp Feature: domain Description: GIIM Note: maturase Location: 441 01 5-441 21 3 bp Feature: gene Location: 441767-442135 bp Feature: gene Location: 442131-442819 bp Feature: domain Description: InsE Location: 442140-442425 bp Feature: domain Description: InsE Location: 4421 40-442425 bp Feature: gene Location: 1032308-1033648 bp Ori: QFH84299.1 Feature: domain Description: phage_term_2 Location: 1032353-1033250 bp Feature: domain Description: phage_term_2 Location: 1 032353-1 033250 bp Feature: gene Location: 1033787-1034263 bp Feature: domain Description: PHA02517 Location: 1033790-1034255 bp Feature: domain Description: PHA0251 7 Location: 1 033790-1 034255 bp Feature: gene Location: 1034344-1035867 bp Ori: QFH84300.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034617-1035349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03461 7-1 035349 bp Feature: domain Description: GIIM Note: maturase Location: 1035424-1035646 bp Feature: domain Description: GIIM Note: maturase Location: 1 035424-1 035646 bp Feature: gene Location: 1036161-1036571 bp Feature: gene Location: 1036525-1037204 bp Feature: domain Description: InsE Location: 1036537-1036795 bp Feature: domain Description: InsE Location: 1 036537-1 036795 bp Feature: gene Location: 1068488-1068838 bp Feature: gene Location: 1069384-1069860 bp Feature: domain Description: PHA02517 Location: 1069387-1069852 bp Feature: domain Description: PHA0251 7 Location: 1 069387-1 069852 bp Feature: gene Location: 1069941-1071464 bp Ori: QFH84335.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1070214-1070946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 07021 4-1 070946 bp Feature: domain Description: GIIM Note: maturase Location: 1071021-1071243 bp Feature: domain Description: GIIM Note: maturase Location: 1 071 021 -1 071 243 bp Feature: gene Location: 1071758-1072168 bp Feature: gene Location: 1072122-1072801 bp Feature: domain Description: InsE Location: 1072134-1072392 bp Feature: domain Description: InsE Location: 1 0721 34-1 072392 bp Feature: gene Location: 2395662-2395862 bp Feature: gene Location: 2395825-2396301 bp Feature: domain Description: PHA02517 Location: 2395828-2396293 bp Feature: domain Description: PHA0251 7 Location: 2395828-2396293 bp Feature: gene Location: 2396382-2397905 bp Ori: QFH85525.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2396655-2397387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2396655-2397387 bp Feature: domain Description: GIIM Note: maturase Location: 2397462-2397684 bp Feature: domain Description: GIIM Note: maturase Location: 2397462-2397684 bp Feature: gene Location: 2398199-2398609 bp Feature: gene Location: 2398563-2399242 bp Feature: domain Description: InsE Location: 2398575-2398833 bp Feature: domain Description: InsE Location: 2398575-2398833 bp Feature: gene Location: 3543556-3544235 bp Feature: domain Description: InsE Location: 3543568-3543826 bp Feature: domain Description: InsE Location: 3543568-3543826 bp Feature: gene Location: 3544189-3544599 bp Feature: gene Location: 3544893-3546416 bp Ori: QFH86485.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3545166-3545898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35451 66-3545898 bp Feature: domain Description: GIIM Note: maturase Location: 3545973-3546195 bp Feature: domain Description: GIIM Note: maturase Location: 3545973-35461 95 bp Feature: gene Location: 3546497-3546973 bp Feature: domain Description: PHA02517 Location: 3546500-3546965 bp Feature: domain Description: PHA0251 7 Location: 3546500-3546965 bp Feature: gene Location: 3547072-3547275 bp Ori: QFH87764.1 Feature: domain Description: PRK09678 Location: 3547117-3547273 bp Feature: domain Description: PRK09678 Location: 35471 1 7-3547273 bp Feature: gene Location: 4002104-4002256 bp Feature: domain Description: Sigma70_r4 Location: 4002131-4002227 bp Feature: domain Description: Sigma70_r4 Location: 40021 31 -4002227 bp Feature: gene Location: 4002273-4002749 bp Feature: domain Description: PHA02517 Location: 4002276-4002741 bp Feature: domain Description: PHA0251 7 Location: 4002276-4002741 bp Feature: gene Location: 4002830-4004353 bp Ori: QFH86902.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4003103-4003835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40031 03-4003835 bp Feature: domain Description: GIIM Note: maturase Location: 4003910-4004132 bp Feature: domain Description: GIIM Note: maturase Location: 400391 0-40041 32 bp Feature: gene Location: 4004647-4005057 bp Feature: gene Location: 4005011-4005690 bp Feature: domain Description: InsE Location: 4005023-4005281 bp Feature: domain Description: InsE Location: 4005023-4005281 bp Feature: gene Location: 4025498-4026631 bp Ori: QFH86918.1 Feature: domain Description: PFDH_like Location: 4025501-4026629 bp Feature: domain Description: PFDH_like Location: 4025501 -4026629 bp Feature: gene Location: 4026983-4027441 bp Feature: domain Description: PHA02517 Location: 4026986-4027433 bp Feature: domain Description: PHA0251 7 Location: 4026986-4027433 bp Feature: gene Location: 4027522-4029045 bp Ori: QFH86919.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4027795-4028527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4027795-4028527 bp Feature: domain Description: GIIM Note: maturase Location: 4028602-4028824 bp Feature: domain Description: GIIM Note: maturase Location: 4028602-4028824 bp Feature: gene Location: 4029339-4029710 bp Feature: gene Location: 4029703-4030388 bp Feature: domain Description: InsE Location: 4029715-4029979 bp Feature: domain Description: InsE Location: 402971 5-4029979 bp Feature: gene Location: 4553796-4554029 bp Ori: QFH87395.1 Feature: domain Description: DUF903 Location: 4553874-4554018 bp Feature: domain Description: DUF903 Location: 4553874-455401 8 bp Feature: gene Location: 4554045-4554272 bp Ori: QFH87396.1 Feature: domain Description: DUF903 Location: 4554123-4554261 bp Feature: domain Description: DUF903 Location: 45541 23-4554261 bp Feature: gene Location: 4554378-4555004 bp Ori: QFH87397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554699-4554909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554699-4554909 bp Feature: gene Location: 4555039-4555732 bp Feature: domain Description: Zn_Tnp_IS1 Location: 4555042-4555144 bp Feature: domain Description: Zn_Tnp_IS1 Location: 4555042-45551 44 bp Feature: domain Description: HTH_Tnp_IS1 Location: 4555165-4555300 bp Feature: domain Description: HTH_Tnp_IS1 Location: 45551 65-4555300 bp Feature: gene Location: 4555866-4556342 bp Feature: domain Description: PHA02517 Location: 4555869-4556334 bp Feature: domain Description: PHA0251 7 Location: 4555869-4556334 bp Feature: gene Location: 4556423-4557946 bp Ori: QFH87398.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4556696-4557428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4556696-4557428 bp Feature: domain Description: GIIM Note: maturase Location: 4557503-4557725 bp Feature: domain Description: GIIM Note: maturase Location: 4557503-4557725 bp Feature: gene Location: 4558240-4558650 bp Feature: gene Location: 4558604-4559283 bp Feature: domain Description: InsE Location: 4558616-4558874 bp Feature: domain Description: InsE Location: 455861 6-4558874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), phage_term_2 (TIGR01547), PRK09678 (DNA-binding transcriptional regulator; Provisional), Sigma70_r4 (pfam04545), PFDH_like (cd08282), DUF903 (pfam06004), Zn_Tnp_IS1 (pfam03811)
HTH_Tnp_IS1 (pfam12759)