myRT

myRT report for GCA_008931685.1_ASM893168v1

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Seq: CP042534.1 Citrobacter freundii strain E51 chromosome, complete genome (5070767 bp)
Overview 1 RT 1: 2724010-2729307 bp 2 RT 2: 4417058-4420988 bp Neighborhood of RT #1 [2724010, 2729318] emrE RVT-UG12 HTH_38 Tra8 Neighborhood of RT #2 [4417058, 4421011] InsE RVT-GII GIIM PHA02517 HTH_XRE Feature: gene Location: 2724010-2724603 bp Feature: gene Location: 2725011-2725343 bp Ori: QFI27804.1 Feature: domain Description: emrE Location: 2725014-2725341 bp Feature: domain Description: emrE Location: 272501 4-2725341 bp Feature: gene Location: 2725588-2727165 bp Ori: QFI27805.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2725975-2726404 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 2725975-2726404 bp Feature: gene Location: 2727156-2727863 bp Feature: gene Location: 2728158-2729318 bp Ori: QFI27807.1 Feature: domain Description: HTH_38 Location: 2728188-2728284 bp Feature: domain Description: HTH_38 Location: 27281 88-2728284 bp Feature: domain Description: Tra8 Location: 2728344-2729307 bp Feature: domain Description: Tra8 Location: 2728344-2729307 bp Feature: gene Location: 4417058-4417743 bp Feature: domain Description: InsE Location: 4417070-4417334 bp Feature: domain Description: InsE Location: 441 7070-441 7334 bp Feature: gene Location: 4417736-4418077 bp Feature: gene Location: 4418401-4419924 bp Ori: QFI29327.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4418674-4419406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 8674-441 9406 bp Feature: domain Description: GIIM Note: maturase Location: 4419481-4419679 bp Feature: domain Description: GIIM Note: maturase Location: 441 9481 -441 9679 bp Feature: gene Location: 4420005-4420463 bp Feature: domain Description: PHA02517 Location: 4420008-4420455 bp Feature: domain Description: PHA0251 7 Location: 4420008-4420455 bp Feature: gene Location: 4420841-4421011 bp Ori: QFI29328.1 Feature: domain Description: HTH_XRE Location: 4420850-4420988 bp Feature: domain Description: HTH_XRE Location: 4420850-4420988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT emrE (PRK09541), RVT-UG12, HTH_38 (pfam13936), Tra8 (COG2826), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_XRE (smart00530)