myRT

myRT report for GCA_008932245.1_ASM893224v1

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Seq: CP034910.1 Ensifer alkalisoli strain YIC4027 chromosome 2, complete sequence (1981775 bp)
Overview 1 RT 1: 302009-307355 bp Neighborhood of RT #1 [302009, 307355] M20_ArgE_DapE-like HTH_24 NagC RVT-GII GIIM CE4_HpPgdA_like Feature: gene Location: 302009-303268 bp Ori: QFI68780.1 Feature: domain Description: M20_ArgE_DapE-like Location: 302078-303221 bp Feature: domain Description: M20_ArgE_DapE-like Location: 302078-303221 bp Feature: gene Location: 303265-304479 bp Ori: QFI68781.1 Feature: domain Description: HTH_24 Location: 303304-303433 bp Feature: domain Description: HTH_24 Location: 303304-303433 bp Feature: domain Description: NagC Location: 303499-304384 bp Feature: domain Description: NagC Location: 303499-304384 bp Feature: gene Location: 304804-305577 bp Ori: QFI68782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304807-305200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304807-305200 bp Feature: domain Description: GIIM Note: maturase Location: 305269-305482 bp Feature: domain Description: GIIM Note: maturase Location: 305269-305482 bp Feature: gene Location: 306185-306460 bp Ori: QFI68783.1 Feature: domain Description: CE4_HpPgdA_like Location: 306269-306443 bp Feature: domain Description: CE4_HpPgdA_like Location: 306269-306443 bp Feature: gene Location: 306729-307355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M20_ArgE_DapE-like (cd08659), HTH_24 (pfam13412), NagC (COG1940), RVT-GII, GIIM (pfam08388), CE4_HpPgdA_like (cd10938)

Seq: CP034909.1 Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence (3690234 bp)
Overview 1 RT 1: 684097-688756 bp 2 RT 2: 3131567-3136970 bp Neighborhood of RT #1 [684097, 688806] RVT-CRISPR-like GIY-YIG_SLX1_like Porin_2 Neighborhood of RT #2 [3131567, 3136970] PRK12278 INT_C_like_1 RVT-UNC HTH_17 Feature: gene Location: 684097-684390 bp Feature: gene Location: 684466-685212 bp Feature: gene Location: 685254-686837 bp Ori: QFI65569.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 685878-686373 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 685878-686373 bp Feature: gene Location: 686983-687168 bp Ori: QFI65570.1 Feature: domain Description: GIY-YIG_SLX1_like Location: 686986-687133 bp Feature: domain Description: GIY-YIG_SLX1_like Location: 686986-687133 bp Feature: gene Location: 687772-688806 bp Ori: QFI65571.1 Feature: domain Description: Porin_2 Location: 687844-688756 bp Feature: domain Description: Porin_2 Location: 687844-688756 bp Feature: gene Location: 3131567-3131944 bp Ori: QFI67970.1 Feature: domain Description: PRK12278 Location: 3131570-3131939 bp Feature: domain Description: PRK12 2 78 Location: 3131570-3131939 bp Feature: gene Location: 3132455-3134119 bp Ori: QFI67971.1 Feature: domain Description: INT_C_like_1 Location: 3133508-3134060 bp Feature: domain Description: INT_C_like_1 Location: 3133508-3134060 bp Feature: gene Location: 3134906-3136372 bp Ori: QFI67972.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 3135695-3135911 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3135695-3135911 bp Feature: gene Location: 3136433-3136642 bp Ori: QFI67973.1 Feature: domain Description: HTH_17 Location: 3136466-3136610 bp Feature: domain Description: HTH_17 Location: 3136466-3136610 bp Feature: gene Location: 3136857-3136970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIY-YIG_SLX1_like (cd10449), Porin_2 (pfam02530), PRK12278 (50S ribosomal protein L21), INT_C_like_1 (cd01184), RVT-UG25/RVT-Retrons/RVT-CRISPR(RVT-UNC), HTH_17 (pfam12728)