myRT

myRT report for GCA_008935055.1_ASM893505v1

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Seq: CP043028.1 Pseudobutyrivibrio xylanivorans strain MA3014 chromosome 1, complete sequence (3412851 bp)
Overview 1 RT 1: 1797021-1802748 bp 2 RT 2: 1893575-1900639 bp Neighborhood of RT #1 [1797021, 1802762] MurD YvyF RVT-GII GIIM dCache_1 Tar Neighborhood of RT #2 [1893575, 1900639] TPR_12 HRDC HTH_3 RVT-GII GIIM ToxN_toxin Feature: gene Location: 1797021-1798310 bp Ori: QFJ54837.1 Gene: murD Feature: domain Description: MurD Location: 1797048-1798302 bp Feature: domain Description: MurD Location: 1 797048-1 798302 bp Feature: gene Location: 1798365-1798637 bp Ori: QFJ54838.1 Feature: domain Description: YvyF Location: 1798419-1798629 bp Feature: domain Description: YvyF Location: 1 79841 9-1 798629 bp Feature: gene Location: 1798783-1800177 bp Ori: QFJ54839.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1799101-1799725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7991 01 -1 799725 bp Feature: domain Description: GIIM Note: maturase Location: 1799782-1799995 bp Feature: domain Description: GIIM Note: maturase Location: 1 799782-1 799995 bp Feature: gene Location: 1800347-1800463 bp Feature: gene Location: 1800729-1802762 bp Ori: QFJ54841.1 Feature: domain Description: dCache_1 Location: 1801038-1801563 bp Feature: domain Description: dCache_1 Location: 1 801 038-1 801 563 bp Feature: domain Description: Tar Location: 1801563-1802748 bp Feature: domain Description: Tar Location: 1 801 563-1 802748 bp Feature: gene Location: 1893575-1895089 bp Ori: QFJ54919.1 Feature: domain Description: TPR_12 Location: 1893956-1894031 bp Feature: domain Description: TPR_1 2 Location: 1 893956-1 894031 bp Feature: domain Description: HRDC Location: 1894892-1895075 bp Feature: domain Description: HRDC Location: 1 894892-1 895075 bp Feature: gene Location: 1895106-1896686 bp Ori: QFJ54920.1 Feature: domain Description: HTH_3 Location: 1895151-1895304 bp Feature: domain Description: HTH_3 Location: 1 8951 51 -1 895304 bp Feature: gene Location: 1896931-1898214 bp Ori: QFJ54921.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1897141-1897756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8971 41 -1 897756 bp Feature: domain Description: GIIM Note: maturase Location: 1897816-1898041 bp Feature: domain Description: GIIM Note: maturase Location: 1 89781 6-1 898041 bp Feature: gene Location: 1899155-1899673 bp Ori: QFJ54922.1 Feature: domain Description: ToxN_toxin Location: 1899167-1899650 bp Feature: domain Description: ToxN_toxin Location: 1 8991 67-1 899650 bp Feature: gene Location: 1899995-1900639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurD (COG0771), YvyF (TIGR03826), RVT-GII, GIIM (pfam08388), dCache_1 (pfam02743), Tar (COG0840), TPR_12 (pfam13424), HRDC (smart00341), HTH_3 (pfam01381), ToxN_toxin (pfam13958)