myRT

myRT report for GCA_008949495.1_ASM894949v1

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Seq: CP043033.1 Escherichia coli strain XDL chromosome, complete genome (5134250 bp)
Overview 1 RT 1: 989320-992787 bp 2 RT 2: 3065944-3069944 bp Neighborhood of RT #1 [989320, 993190] PHA02517 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [3065944, 3069952] DcuC RVT-GII RVT-GII Asparaginase_2 Feature: gene Location: 989320-989661 bp Ori: QFI49012.1 Feature: domain Description: PHA02517 Location: 989350-989653 bp Feature: domain Description: PHA0251 7 Location: 989350-989653 bp Feature: gene Location: 989770-990231 bp Feature: domain Description: PHA02517 Location: 989773-990223 bp Feature: domain Description: PHA0251 7 Location: 989773-990223 bp Feature: gene Location: 990312-991820 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990570-991302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990570-991 302 bp Feature: domain Description: GIIM Note: maturase Location: 991377-991596 bp Feature: domain Description: GIIM Note: maturase Location: 991 377-991 596 bp Feature: gene Location: 992129-992500 bp Feature: gene Location: 992493-993190 bp Feature: domain Description: InsE Location: 992523-992787 bp Feature: domain Description: InsE Location: 992523-992787 bp Feature: gene Location: 3065944-3067305 bp Ori: QFI50797.1 Feature: domain Description: DcuC Location: 3065947-3067279 bp Feature: domain Description: DcuC Location: 3065947-3067279 bp Feature: gene Location: 3067358-3067585 bp Feature: gene Location: 3067951-3068397 bp Ori: QFI50798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068257-3068359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068257-3068359 bp Feature: gene Location: 3068349-3068513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068352-3068508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3068352-3068508 bp Feature: gene Location: 3068540-3068763 bp Feature: gene Location: 3068921-3069952 bp Ori: QFI50799.1 Feature: domain Description: Asparaginase_2 Location: 3069011-3069944 bp Feature: domain Description: Asparaginase_2 Location: 306901 1 -3069944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), DcuC (TIGR00771), Asparaginase_2 (pfam01112)