myRT

myRT report for GCA_009184745.1_ASM918474v1

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Seq: CP045071.1 Vibrio harveyi strain WXL538 chromosome 2, complete sequence (2321268 bp)
Overview 1 RT 1: 1752588-1757122 bp Neighborhood of RT #1 [1752588, 1757142] RVT-Retrons PRK09737 PRK09737 PRK09737 Feature: gene Location: 1752588-1753478 bp Feature: gene Location: 1753530-1753763 bp Feature: gene Location: 1754023-1754973 bp Ori: QFQ80811.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1754224-1754806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 754224-1 754806 bp Feature: gene Location: 1754984-1755442 bp Feature: gene Location: 1755535-1757142 bp Ori: QFQ80813.1 Feature: domain Description: PRK09737 Location: 1755601-1755856 bp Feature: domain Description: PRK09737 Location: 1 755601 -1 755856 bp Feature: domain Description: PRK09737 Location: 1755865-1756249 bp Feature: domain Description: PRK09737 Location: 1 755865-1 756249 bp Feature: domain Description: PRK09737 Location: 1756414-1757122 bp Feature: domain Description: PRK09737 Location: 1 75641 4-1 7571 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09737 (type I restriction-modification system specificity subunit)

Seq: CP045070.1 Vibrio harveyi strain WXL538 chromosome 1, complete sequence (3684225 bp)
Overview 1 RT 1: 1206156-1208617 bp 2 RT 2: 3073153-3080667 bp Neighborhood of RT #1 [1206156, 1208619] DUF3265 RVT-UG11 DUF3265 VasI Neighborhood of RT #2 [3073153, 3080837] DnaG PRK05658 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 1206156-1206599 bp Feature: gene Location: 1206614-1206706 bp Ori: QFQ77021.1 Feature: domain Description: DUF3265 Location: 1206623-1206704 bp Feature: domain Description: DUF32 65 Location: 12 0662 3-12 06704 bp Feature: gene Location: 1206714-1207490 bp Ori: QFQ77022.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1206846-1207302 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 12 06846-12 07302 bp Feature: gene Location: 1207863-1207967 bp Ori: QFQ79217.1 Feature: domain Description: DUF3265 Location: 1207884-1207965 bp Feature: domain Description: DUF32 65 Location: 12 07884-12 07965 bp Feature: gene Location: 1208014-1208619 bp Ori: QFQ77023.1 Feature: domain Description: VasI Location: 1208098-1208617 bp Feature: domain Description: VasI Location: 12 08098-12 08617 bp Feature: gene Location: 3073153-3074910 bp Ori: QFQ78631.1 Gene: dnaG Feature: domain Description: DnaG Location: 3073168-3074890 bp Feature: domain Description: DnaG Location: 3073168-3074890 bp Feature: gene Location: 3075010-3076872 bp Ori: QFQ78632.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 3075016-3076870 bp Feature: domain Description: PRK05658 Location: 3075016-3076870 bp Feature: gene Location: 3077580-3078521 bp Ori: QFQ78633.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3077682-3078282 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3077682 -30782 82 bp Feature: gene Location: 3078514-3080196 bp Ori: QFQ78634.1 Feature: domain Description: COG3950 Location: 3078730-3080089 bp Feature: domain Description: COG3950 Location: 3078730-3080089 bp Feature: gene Location: 3080193-3080837 bp Ori: QFQ78635.1 Feature: domain Description: TIGR02646 Location: 3080259-3080667 bp Feature: domain Description: TIGR02 646 Location: 30802 59-3080667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3265 (pfam11665), RVT-UG11, VasI (pfam11319), DnaG (COG0358), PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)