myRT

myRT report for GCA_009184765.2_ASM918476v2

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Seq: CP045064.2 Enterobacter roggenkampii strain WCHER090065 chromosome, complete genome (4872204 bp)
Overview 1 RT 1: 958295-962370 bp 2 RT 2: 1771827-1775866 bp 3 RT 3: 2170275-2174563 bp 4 RT 4: 3993845-3998070 bp Neighborhood of RT #1 [958295, 962779] COG3547 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [1771827, 1776275] IS5 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #3 [2170275, 2174563] HTH_23 HTH_33 DDE_3 PHA02517 RVT-GII GIIM Neighborhood of RT #4 [3993845, 3998069] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 958295-959371 bp Ori: QFQ84774.1 Feature: domain Description: COG3547 Location: 958334-959255 bp Feature: domain Description: COG3547 Location: 958334-959255 bp Feature: gene Location: 959653-959832 bp Feature: domain Description: PHA02517 Location: 959656-959833 bp Feature: domain Description: PHA0251 7 Location: 959656-959833 bp Feature: gene Location: 959913-961421 bp Ori: QFQ85816.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 960171-960903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9601 71 -960903 bp Feature: domain Description: GIIM Note: maturase Location: 960978-961176 bp Feature: domain Description: GIIM Note: maturase Location: 960978-961 1 76 bp Feature: gene Location: 961730-962101 bp Feature: gene Location: 962094-962779 bp Feature: domain Description: InsE Location: 962106-962370 bp Feature: domain Description: InsE Location: 9621 06-962370 bp Feature: gene Location: 1771827-1772801 bp Ori: QFQ84040.1 Feature: domain Description: IS5 Location: 1772013-1772784 bp Feature: domain Description: IS5 Location: 1 77201 3-1 772784 bp Feature: gene Location: 1772852-1773328 bp Feature: domain Description: PHA02517 Location: 1772855-1773320 bp Feature: domain Description: PHA0251 7 Location: 1 772855-1 773320 bp Feature: gene Location: 1773409-1774917 bp Ori: QFQ85779.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773667-1774399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 773667-1 774399 bp Feature: domain Description: GIIM Note: maturase Location: 1774474-1774672 bp Feature: domain Description: GIIM Note: maturase Location: 1 774474-1 774672 bp Feature: gene Location: 1775226-1775636 bp Feature: gene Location: 1775590-1776275 bp Feature: domain Description: InsE Location: 1775605-1775866 bp Feature: domain Description: InsE Location: 1 775605-1 775866 bp Feature: gene Location: 2170275-2171306 bp Ori: QFQ83715.1 Feature: domain Description: HTH_23 Location: 2170359-2170494 bp Feature: domain Description: HTH_23 Location: 21 70359-21 70494 bp Feature: domain Description: HTH_33 Location: 2170599-2170746 bp Feature: domain Description: HTH_33 Location: 21 70599-21 70746 bp Feature: domain Description: DDE_3 Location: 2170806-2171223 bp Feature: domain Description: DDE_3 Location: 21 70806-21 71 223 bp Feature: gene Location: 2171390-2171872 bp Feature: domain Description: PHA02517 Location: 2171393-2171855 bp Feature: domain Description: PHA0251 7 Location: 21 71 393-21 71 855 bp Feature: gene Location: 2171953-2173461 bp Ori: QFQ85757.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2172211-2172943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7221 1 -21 72943 bp Feature: domain Description: GIIM Note: maturase Location: 2173018-2173216 bp Feature: domain Description: GIIM Note: maturase Location: 21 7301 8-21 7321 6 bp Feature: gene Location: 2173770-2174180 bp Feature: gene Location: 2174134-2174563 bp Feature: gene Location: 3993845-3994921 bp Ori: QFQ82144.1 Feature: domain Description: COG3547 Location: 3993884-3994805 bp Feature: domain Description: COG3547 Location: 3993884-3994805 bp Feature: gene Location: 3995203-3995382 bp Feature: domain Description: PHA02517 Location: 3995206-3995383 bp Feature: domain Description: PHA0251 7 Location: 3995206-3995383 bp Feature: gene Location: 3995463-3996971 bp Ori: QFQ85667.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3995721-3996453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3995721 -3996453 bp Feature: domain Description: GIIM Note: maturase Location: 3996528-3996726 bp Feature: domain Description: GIIM Note: maturase Location: 3996528-3996726 bp Feature: gene Location: 3997280-3997648 bp Feature: gene Location: 3997644-3998069 bp Feature: domain Description: PHA02517 Location: 3997734-3998070 bp Feature: domain Description: PHA0251 7 Location: 3997734-3998070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), IS5 (COG3039), HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: CP045065.1 Enterobacter roggenkampii strain WCHER090065 plasmid pMCR10_090065, complete sequence (71775 bp)
Overview 1 RT 1: 7433-12953 bp Neighborhood of RT #1 [7433, 12982] umuC PRK10276 RVT-GII InsA LysR Feature: gene Location: 7433-8704 bp Ori: QFQ85868.1 Gene: umuC Feature: domain Description: umuC Location: 7436-8696 bp Feature: domain Description: umuC Location: 7436-8696 bp Feature: gene Location: 8704-9135 bp Ori: QFQ85869.1 Gene: umuD Feature: domain Description: PRK10276 Location: 8755-9118 bp Feature: domain Description: PRK102 76 Location: 8755-9118 bp Feature: gene Location: 9544-11028 bp Ori: QFQ85916.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9946-10636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9946-10636 bp Feature: gene Location: 11180-11877 bp Feature: domain Description: InsA Location: 11186-11453 bp Feature: domain Description: InsA Location: 11186-11453 bp Feature: gene Location: 12074-12982 bp Ori: QFQ85871.1 Feature: domain Description: LysR Location: 12092-12953 bp Feature: domain Description: LysR Location: 12 092 -12 953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), LysR (COG0583)