myRT

myRT report for GCA_009362915.1_ASM936291v1

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Seq: CP045224.1 Clostridioides difficile strain TW11 chromosome, complete genome (4100340 bp)
Overview 1 RT 1: 2032901-2038356 bp 2 RT 2: 2051116-2063663 bp 3 RT 3: 2082164-2087890 bp Neighborhood of RT #1 [2032901, 2038358] MFS RVT-GII HNHc MobA_MobL SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Neighborhood of RT #2 [2051116, 2063866] Uup Uup RVT_N RVT-GII GIIM YtxK COG4646 RadC Neighborhood of RT #3 [2082164, 2088006] Maff2 RVT-GII HNHc Maff2 VirD4 VirD4 Feature: gene Location: 2032901-2033110 bp Feature: gene Location: 2033348-2034568 bp Ori: QFS31539.1 Gene: tet(40) Feature: domain Description: MFS Location: 2033390-2034539 bp Feature: domain Description: MFS Location: 2033390-2034539 bp Feature: gene Location: 2034884-2035795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2034890-2034980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2034890-2034980 bp Feature: domain Description: HNHc Note: nucleases Location: 2035526-2035679 bp Feature: domain Description: HNHc Note: nucleases Location: 2035526-2035679 bp Feature: gene Location: 2035792-2036130 bp Feature: domain Description: MobA_MobL Location: 2035846-2036128 bp Feature: domain Description: MobA_MobL Location: 2035846-20361 28 bp Feature: gene Location: 2036781-2038358 bp Ori: QFS33321.1 Feature: domain Description: SR_TndX_transposase Location: 2036784-2037186 bp Feature: domain Description: SR_TndX_transposase Location: 2036784-20371 86 bp Feature: domain Description: Recombinase Location: 2037288-2037669 bp Feature: domain Description: Recombinase Location: 2037288-2037669 bp Feature: domain Description: Zn_ribbon_recom Location: 2037702-2037882 bp Feature: domain Description: Zn_ribbon_recom Location: 2037702-2037882 bp Feature: domain Description: DUF4368 Location: 2038158-2038356 bp Feature: domain Description: DUF4368 Location: 20381 58-2038356 bp Feature: gene Location: 2051116-2052576 bp Ori: QFS31553.1 Gene: lsa Feature: domain Description: Uup Location: 2051119-2051308 bp Feature: domain Description: Uup Location: 2051 1 1 9-2051 308 bp Feature: domain Description: Uup Location: 2051398-2052571 bp Feature: domain Description: Uup Location: 2051 398-2052571 bp Feature: gene Location: 2053177-2054166 bp Feature: gene Location: 2054167-2055837 bp Ori: QFS31555.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2054212-2054455 bp Feature: domain Description: RVT_N Location: 205421 2-2054455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054500-2055148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054500-20551 48 bp Feature: domain Description: GIIM Note: maturase Location: 2055202-2055433 bp Feature: domain Description: GIIM Note: maturase Location: 2055202-2055433 bp Feature: gene Location: 2056530-2063207 bp Feature: domain Description: YtxK Location: 2059494-2060196 bp Feature: domain Description: YtxK Location: 2059494-20601 96 bp Feature: domain Description: COG4646 Location: 2060259-2062827 bp Feature: domain Description: COG4646 Location: 2060259-2062827 bp Feature: gene Location: 2063225-2063866 bp Ori: QFS31556.1 Feature: domain Description: RadC Location: 2063303-2063663 bp Feature: domain Description: RadC Location: 2063303-2063663 bp Feature: gene Location: 2082164-2083033 bp Feature: gene Location: 2083045-2083173 bp Ori: QFS33327.1 Feature: domain Description: Maff2 Location: 2083078-2083168 bp Feature: domain Description: Maff2 Location: 2083078-20831 68 bp Feature: gene Location: 2083293-2085179 bp Ori: QFS31564.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2083626-2084364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2083626-2084364 bp Feature: domain Description: HNHc Note: nucleases Location: 2084910-2085063 bp Feature: domain Description: HNHc Note: nucleases Location: 208491 0-2085063 bp Feature: gene Location: 2085899-2086030 bp Ori: QFS31565.1 Feature: domain Description: Maff2 Location: 2085902-2086028 bp Feature: domain Description: Maff2 Location: 2085902-2086028 bp Feature: gene Location: 2086105-2088006 bp Ori: QFS33328.1 Feature: domain Description: VirD4 Location: 2086351-2086702 bp Feature: domain Description: VirD4 Location: 2086351 -2086702 bp Feature: domain Description: VirD4 Location: 2086792-2087890 bp Feature: domain Description: VirD4 Location: 2086792-2087890 bp Sorry, your browser does not support inline SVG.
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