myRT

myRT report for GCA_009362935.1_ASM936293v1

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Seq: CP045240.1 Lactobacillus vaginalis strain LV515 chromosome, complete genome (1894710 bp)
Overview 1 RT 1: 512063-518156 bp 2 RT 2: 1704931-1711576 bp Neighborhood of RT #1 [512063, 518185] ddl HTH_XRE TPR TPR RVT-GII ARA1 MngR PBP1_AraR Neighborhood of RT #2 [1704931, 1711581] Tra8 2A0302 RVT-GII YfcC Feature: gene Location: 512063-513199 bp Ori: QFS33829.1 Feature: domain Description: ddl Location: 512072-513110 bp Feature: domain Description: ddl Location: 51 2072-51 31 1 0 bp Feature: gene Location: 513459-514301 bp Ori: QFS33830.1 Feature: domain Description: HTH_XRE Location: 513474-513636 bp Feature: domain Description: HTH_XRE Location: 51 3474-51 3636 bp Feature: domain Description: TPR Location: 513693-513873 bp Feature: domain Description: TPR Location: 51 3693-51 3873 bp Feature: domain Description: TPR Location: 513918-514227 bp Feature: domain Description: TPR Location: 51 391 8-51 4227 bp Feature: gene Location: 514791-516180 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 515109-515454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 51 09-51 5454 bp Feature: gene Location: 516265-517104 bp Ori: QFS33831.1 Feature: domain Description: ARA1 Location: 516289-517054 bp Feature: domain Description: ARA1 Location: 51 6289-51 7054 bp Feature: gene Location: 517106-518185 bp Feature: domain Description: MngR Location: 517118-517193 bp Feature: domain Description: MngR Location: 51 71 1 8-51 71 93 bp Feature: domain Description: PBP1_AraR Location: 517346-518156 bp Feature: domain Description: PBP1 _AraR Location: 51 7346-51 81 56 bp Feature: gene Location: 1704931-1706061 bp Ori: QFS34864.1 Feature: domain Description: Tra8 Location: 1704985-1706002 bp Feature: domain Description: Tra8 Location: 1 704985-1 706002 bp Feature: gene Location: 1706118-1707575 bp Ori: QFS34865.1 Feature: domain Description: 2A0302 Location: 1706139-1707570 bp Feature: domain Description: 2A0302 Location: 1 7061 39-1 707570 bp Feature: gene Location: 1707940-1709321 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1708258-1708876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 708258-1 708876 bp Feature: gene Location: 1709364-1709510 bp Feature: gene Location: 1710034-1711581 bp Ori: QFS34866.1 Feature: domain Description: YfcC Location: 1710058-1711576 bp Feature: domain Description: YfcC Location: 1 71 0058-1 71 1 576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ddl (PRK01966), HTH_XRE (smart00530), TPR (smart00028), RVT-GII, ARA1 (COG0656), MngR (COG2188), PBP1_AraR (cd01541), Tra8 (COG2826), 2A0302 (TIGR00905), YfcC (COG1288)