myRT

myRT report for GCA_009363115.1_ASM936311v1

Download annotations/find similar RTs

Seq: CP045298.1 Paenibacillus brasilensis strain KACC 13842 chromosome, complete genome (5608532 bp)
Overview 1 RT 1: 637698-640696 bp 2 RT 2: 2942911-2946451 bp 3 RT 3: 4637336-4655186 bp 4 RT 4: 4987393-4989934 bp Neighborhood of RT #1 [637698, 640696] DDE_Tnp_1_6 RVT-GII GIIM Neighborhood of RT #2 [2942911, 2946648] RpoE RVT-GII GIIM YloU AcrR Neighborhood of RT #3 [4637336, 4655186] FabZ PRK12467 PRK12316 PRK05691 EntF RVT-GII RVT-GII GIIM MDR4 Neighborhood of RT #4 [4987393, 4989934] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 637698-637934 bp Feature: gene Location: 637970-638470 bp Feature: domain Description: DDE_Tnp_1_6 Location: 638081-638435 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 638081 -638435 bp Feature: gene Location: 638585-639988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 638900-639527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 638900-639527 bp Feature: domain Description: GIIM Note: maturase Location: 639584-639812 bp Feature: domain Description: GIIM Note: maturase Location: 639584-63981 2 bp Feature: gene Location: 640196-640459 bp Feature: gene Location: 640469-640696 bp Feature: gene Location: 2942911-2943513 bp Feature: domain Description: RpoE Location: 2942977-2943463 bp Feature: domain Description: RpoE Location: 2942977-2943463 bp Feature: gene Location: 2943822-2944028 bp Feature: gene Location: 2944106-2945506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2944418-2945045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294441 8-2945045 bp Feature: domain Description: GIIM Note: maturase Location: 2945102-2945321 bp Feature: domain Description: GIIM Note: maturase Location: 29451 02-2945321 bp Feature: gene Location: 2945678-2946028 bp Feature: domain Description: YloU Location: 2945687-2946014 bp Feature: domain Description: YloU Location: 2945687-294601 4 bp Feature: gene Location: 2946079-2946648 bp Feature: domain Description: AcrR Location: 2946115-2946451 bp Feature: domain Description: AcrR Location: 29461 1 5-2946451 bp Feature: gene Location: 4637336-4637743 bp Feature: domain Description: FabZ Location: 4637372-4637726 bp Feature: domain Description: FabZ Location: 4637372-4637726 bp Feature: gene Location: 4637837-4650820 bp Feature: domain Description: PRK12467 Location: 4637861-4643588 bp Feature: domain Description: PRK1 2467 Location: 4637861 -4643588 bp Feature: domain Description: PRK12316 Location: 4643711-4647395 bp Feature: domain Description: PRK1 231 6 Location: 464371 1 -4647395 bp Feature: domain Description: PRK05691 Location: 4648109-4650074 bp Feature: domain Description: PRK05691 Location: 46481 09-4650074 bp Feature: domain Description: EntF Location: 4650125-4650782 bp Feature: domain Description: EntF Location: 46501 25-4650782 bp Feature: gene Location: 4651327-4652088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651639-4652077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651 639-4652077 bp Feature: gene Location: 4652115-4652726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4652121-4652265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46521 21 -4652265 bp Feature: domain Description: GIIM Note: maturase Location: 4652322-4652550 bp Feature: domain Description: GIIM Note: maturase Location: 4652322-4652550 bp Feature: gene Location: 4653245-4654186 bp Feature: domain Description: MDR4 Location: 4653251-4654181 bp Feature: domain Description: MDR4 Location: 4653251 -46541 81 bp Feature: gene Location: 4654308-4655186 bp Feature: gene Location: 4987393-4987680 bp Feature: gene Location: 4987746-4988300 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4988088-4988268 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4988088-4988268 bp Feature: gene Location: 4988333-4989262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4988339-4988873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4988339-4988873 bp Feature: domain Description: GIIM Note: maturase Location: 4988924-4989146 bp Feature: domain Description: GIIM Note: maturase Location: 4988924-49891 46 bp Feature: gene Location: 4989231-4989740 bp Feature: gene Location: 4989755-4989934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), RpoE (COG3343), YloU (COG1302), AcrR (COG1309), FabZ (cd01288), PRK12467 (peptide synthase; Provisional), PRK12316 (peptide synthase; Provisional), PRK05691 (peptide synthase; Validated)
EntF (COG3319), MDR4 (cd08270), group_II_RT_mat (TIGR04416)