myRT

myRT report for GCA_009363275.1_ASM936327v1

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Seq: CP045324.1 Marinobacter sp. THAF197a chromosome, complete genome (4264018 bp)
Overview 1 RT 1: 1341260-1344684 bp 2 RT 2: 2411835-2415276 bp Neighborhood of RT #1 [1341260, 1344684] PTDH LysR RVT-GII Neighborhood of RT #2 [2411835, 2415276] YiaG RelE RVT-GII GIIM Feature: gene Location: 1341260-1342270 bp Ori: QFS86427.1 Gene: ptxD Feature: domain Description: PTDH Location: 1341266-1342214 bp Feature: domain Description: PTDH Location: 1 341 266-1 34221 4 bp Feature: gene Location: 1342264-1343124 bp Ori: QFS86428.1 Gene: cysL2 Feature: domain Description: LysR Location: 1342273-1343116 bp Feature: domain Description: LysR Location: 1 342273-1 3431 1 6 bp Feature: gene Location: 1343039-1343608 bp Ori: QFS86429.1 Gene: ltrA1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1343045-1343555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 343045-1 343555 bp Feature: gene Location: 1343982-1344131 bp Feature: gene Location: 1344103-1344684 bp Feature: gene Location: 2411835-2412122 bp Ori: QFS87411.1 Gene: higA-2 Feature: domain Description: YiaG Location: 2411877-2412108 bp Feature: domain Description: YiaG Location: 241 1 877-241 21 08 bp Feature: gene Location: 2412115-2412426 bp Ori: QFS87412.1 Gene: higB-2 Feature: domain Description: RelE Location: 2412244-2412406 bp Feature: domain Description: RelE Location: 241 2244-241 2406 bp Feature: gene Location: 2412577-2413917 bp Ori: QFS87413.1 Gene: ltrA2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412886-2413504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 2886-241 3504 bp Feature: domain Description: GIIM Note: maturase Location: 2413552-2413774 bp Feature: domain Description: GIIM Note: maturase Location: 241 3552-241 3774 bp Feature: gene Location: 2414415-2414747 bp Feature: gene Location: 2414824-2415276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTDH (cd12157), LysR (COG0583), RVT-GII, YiaG (COG2944), RelE (pfam06296), GIIM (pfam08388)