myRT

myRT report for GCA_009387815.1_ASM938781v1

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Seq: CP035210.1 Klebsiella pneumoniae strain TH164 chromosome, complete genome (5381065 bp)
Overview 1 RT 1: 1954251-1961192 bp Neighborhood of RT #1 [1954251, 1961509] RVT-Retrons Phage_GPA PAPS_reductase Feature: gene Location: 1954251-1955075 bp Feature: gene Location: 1955237-1955485 bp Feature: gene Location: 1956054-1957793 bp Ori: QFU70049.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1956198-1956819 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9561 98-1 95681 9 bp Feature: gene Location: 1958274-1960496 bp Ori: QFU70050.1 Feature: domain Description: Phage_GPA Location: 1958808-1959771 bp Feature: domain Description: Phage_GPA Location: 1 958808-1 959771 bp Feature: gene Location: 1960493-1961509 bp Ori: QFU70051.1 Feature: domain Description: PAPS_reductase Location: 1960547-1961192 bp Feature: domain Description: PAPS_reductase Location: 1 960547-1 961 1 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_GPA (pfam05840), PAPS_reductase (TIGR02057)

Seq: CP035212.1 Klebsiella pneumoniae strain TH164 plasmid pTH164-1, complete sequence (69596 bp)
Overview 1 RT 1: 12742-16195 bp Neighborhood of RT #1 [12742, 16233] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 12742-13173 bp Ori: QFU73543.1 Feature: domain Description: PRK10276 Location: 12793-13156 bp Feature: domain Description: PRK102 76 Location: 12 793-13156 bp Feature: gene Location: 13331-13582 bp Feature: gene Location: 13582-15066 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13984-14674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13984-14674 bp Feature: gene Location: 15218-15915 bp Feature: domain Description: Zn_Tnp_IS1 Location: 15224-15326 bp Feature: domain Description: Zn_Tnp_IS1 Location: 152 2 4-1532 6 bp Feature: domain Description: HTH_Tnp_IS1 Location: 15347-15479 bp Feature: domain Description: HTH_Tnp_IS1 Location: 15347-15479 bp Feature: gene Location: 15925-16233 bp Feature: domain Description: Rep_3 Location: 15931-16195 bp Feature: domain Description: Rep_3 Location: 15931-16195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)