myRT

myRT report for GCA_009387915.1_ASM938791v1

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Seq: CP035196.1 Klebsiella pneumoniae strain LH375 chromosome, complete genome (5175568 bp)
Overview 1 RT 1: 3860026-3865430 bp Neighborhood of RT #1 [3860026, 3865444] DUF4156 YegP RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 3860026-3860379 bp Ori: QFU56267.1 Feature: domain Description: DUF4156 Location: 3860095-3860371 bp Feature: domain Description: DUF41 56 Location: 3860095-3860371 bp Feature: gene Location: 3860759-3860914 bp Ori: QFU56268.1 Feature: domain Description: YegP Location: 3860768-3860885 bp Feature: domain Description: YegP Location: 3860768-3860885 bp Feature: gene Location: 3861036-3862685 bp Ori: QFU56269.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3861087-3861330 bp Feature: domain Description: RVT_N Location: 3861 087-3861 330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3861375-3862020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3861 375-3862020 bp Feature: domain Description: GIIM Note: maturase Location: 3862074-3862305 bp Feature: domain Description: GIIM Note: maturase Location: 3862074-3862305 bp Feature: domain Description: HNHc Note: nucleases Location: 3862515-3862677 bp Feature: domain Description: HNHc Note: nucleases Location: 386251 5-3862677 bp Feature: gene Location: 3862853-3863082 bp Feature: gene Location: 3863798-3865444 bp Ori: QFU56270.1 Gene: groL Feature: domain Description: groEL Location: 3863804-3865430 bp Feature: domain Description: groEL Location: 3863804-3865430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), YegP (COG3422), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852)

Seq: CP035198.1 Klebsiella pneumoniae strain LH375 plasmid pLH375-2_incR, complete sequence (46873 bp)
Overview 1 RT 1: 8868-12171 bp Neighborhood of RT #1 [8868, 12191] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 8868-9299 bp Ori: QFU57758.1 Feature: domain Description: PRK10276 Location: 8919-9282 bp Feature: domain Description: PRK102 76 Location: 8919-92 82 bp Feature: gene Location: 9457-9708 bp Feature: gene Location: 9708-11192 bp Ori: QFU57783.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10110-10800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10110-10800 bp Feature: gene Location: 11344-12041 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11350-11452 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11350-11452 bp Feature: domain Description: HTH_Tnp_IS1 Location: 11473-11605 bp Feature: domain Description: HTH_Tnp_IS1 Location: 11473-11605 bp Feature: gene Location: 12042-12191 bp Feature: domain Description: Rep_3 Location: 12057-12171 bp Feature: domain Description: Rep_3 Location: 12 057-12 171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)