myRT

myRT report for GCA_009429005.1_ASM942900v1

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Seq: CP045533.1 Bacillaceae bacterium C02 chromosome, complete genome (5188692 bp)
Overview 1 RT 1: 909020-912661 bp 2 RT 2: 2074085-2079880 bp 3 RT 3: 3054209-3060670 bp 4 RT 4: 3692771-3696436 bp 5 RT 5: 3786604-3791673 bp Neighborhood of RT #1 [909020, 912661] RVT-GII HNHc TTHA1623-like_MBL-fold Neighborhood of RT #2 [2074085, 2079882] YphP_YqiW SAM_MT RVT-GII Intron_maturas2 HNHc PRK12451 Neighborhood of RT #3 [3054209, 3060678] Hydrolase_4 HTH_3 TPR RVT_N RVT-GII GIIM GrpB YbaK_EbsC Neighborhood of RT #4 [3692771, 3696450] amiF HNHc RVT-GII amiF Neighborhood of RT #5 [3786604, 3791687] mtnK RVT-GII HNHc RVT-GII nitrilase_5 Feature: gene Location: 909020-909196 bp Feature: gene Location: 909589-909726 bp Feature: gene Location: 910133-911425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910145-910598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 01 45-91 0598 bp Feature: domain Description: HNHc Note: nucleases Location: 911177-911309 bp Feature: domain Description: HNHc Note: nucleases Location: 91 1 1 77-91 1 309 bp Feature: gene Location: 911665-912078 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 911668-912064 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 91 1 668-91 2064 bp Feature: gene Location: 912527-912661 bp Feature: gene Location: 2074085-2074519 bp Feature: domain Description: YphP_YqiW Location: 2074109-2074517 bp Feature: domain Description: YphP_YqiW Location: 20741 09-207451 7 bp Feature: gene Location: 2074569-2075135 bp Feature: domain Description: SAM_MT Location: 2074692-2075124 bp Feature: domain Description: SAM_MT Location: 2074692-20751 24 bp Feature: gene Location: 2075751-2077568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2076015-2076846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207601 5-2076846 bp Feature: domain Description: Intron_maturas2 Location: 2076927-2077218 bp Feature: domain Description: Intron_maturas2 Location: 2076927-207721 8 bp Feature: domain Description: HNHc Note: nucleases Location: 2077365-2077542 bp Feature: domain Description: HNHc Note: nucleases Location: 2077365-2077542 bp Feature: gene Location: 2077726-2077893 bp Feature: gene Location: 2078095-2079882 bp Feature: domain Description: PRK12451 Location: 2078197-2079880 bp Feature: domain Description: PRK1 2451 Location: 20781 97-2079880 bp Feature: gene Location: 3054209-3055225 bp Feature: domain Description: Hydrolase_4 Location: 3054371-3055031 bp Feature: domain Description: Hydrolase_4 Location: 3054371 -3055031 bp Feature: gene Location: 3055238-3056362 bp Feature: domain Description: HTH_3 Location: 3055268-3055430 bp Feature: domain Description: HTH_3 Location: 3055268-3055430 bp Feature: domain Description: TPR Location: 3055994-3056117 bp Feature: domain Description: TPR Location: 3055994-30561 1 7 bp Feature: gene Location: 3056722-3058368 bp Feature: domain Description: RVT_N Location: 3056764-3057001 bp Feature: domain Description: RVT_N Location: 3056764-3057001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057055-3057715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057055-305771 5 bp Feature: domain Description: GIIM Note: maturase Location: 3057784-3058015 bp Feature: domain Description: GIIM Note: maturase Location: 3057784-305801 5 bp Feature: gene Location: 3059085-3059615 bp Feature: domain Description: GrpB Location: 3059097-3059571 bp Feature: domain Description: GrpB Location: 3059097-3059571 bp Feature: gene Location: 3060202-3060678 bp Feature: domain Description: YbaK_EbsC Location: 3060220-3060670 bp Feature: domain Description: YbaK_EbsC Location: 3060220-3060670 bp Feature: gene Location: 3692771-3693394 bp Feature: domain Description: amiF Location: 3692774-3693389 bp Feature: domain Description: amiF Location: 3692774-3693389 bp Feature: gene Location: 3693511-3693837 bp Feature: domain Description: HNHc Note: nucleases Location: 3693586-3693721 bp Feature: domain Description: HNHc Note: nucleases Location: 3693586-3693721 bp Feature: gene Location: 3694032-3695345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3694332-3695037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3694332-3695037 bp Feature: gene Location: 3695738-3695914 bp Feature: gene Location: 3696061-3696450 bp Feature: domain Description: amiF Location: 3696064-3696436 bp Feature: domain Description: amiF Location: 3696064-3696436 bp Feature: gene Location: 3786604-3787785 bp Feature: domain Description: mtnK Location: 3786607-3787765 bp Feature: domain Description: mtnK Location: 3786607-3787765 bp Feature: gene Location: 3788080-3788229 bp Feature: gene Location: 3788330-3789622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3788342-3788795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3788342-3788795 bp Feature: domain Description: HNHc Note: nucleases Location: 3789374-3789506 bp Feature: domain Description: HNHc Note: nucleases Location: 3789374-3789506 bp Feature: gene Location: 3789601-3790164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3789901-3790156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3789901 -37901 56 bp Feature: gene Location: 3790558-3790734 bp Feature: gene Location: 3790881-3791687 bp Feature: domain Description: nitrilase_5 Location: 3791022-3791673 bp Feature: domain Description: nitrilase_5 Location: 3791 022-3791 673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TTHA1623-like_MBL-fold (cd16322), YphP_YqiW (TIGR04191), SAM_MT (pfam04445), Intron_maturas2 (pfam01348), PRK12451 (arginyl-tRNA synthetase; Reviewed), Hydrolase_4 (pfam12146), HTH_3 (pfam01381), TPR (smart00028)
RVT_N (pfam13655), GIIM (pfam08388), GrpB (pfam04229), YbaK_EbsC (TIGR00011), amiF (PRK13287), mtnK (PRK09550), nitrilase_5 (cd07583)

Seq: CP045534.1 Bacillaceae bacterium C02 plasmid unnamed1, complete sequence (162259 bp)
Overview 1 RT 1: 7572-11862 bp 2 RT 2: 16380-21189 bp 3 RT 3: 67014-73208 bp Neighborhood of RT #1 [7572, 11862] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #2 [16380, 21194] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [67014, 73208] LPD1 RVT-GII HNHc DUF3854 Feature: gene Location: 7572-7943 bp Feature: gene Location: 7963-8505 bp Feature: domain Description: PRTRC_ThiF Location: 8026-8485 bp Feature: domain Description: PRTRC_ThiF Location: 802 6-8485 bp Feature: gene Location: 8757-10697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9087-9924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9087-992 4 bp Feature: domain Description: Intron_maturas2 Location: 10062-10368 bp Feature: domain Description: Intron_maturas2 Location: 10062 -10368 bp Feature: domain Description: HNHc Note: nucleases Location: 10491-10644 bp Feature: domain Description: HNHc Note: nucleases Location: 10491-10644 bp Feature: gene Location: 11266-11448 bp Feature: domain Description: E1_enzyme_family Location: 11314-11434 bp Feature: domain Description: E1_enzyme_family Location: 11314-11434 bp Feature: gene Location: 11461-11862 bp Feature: gene Location: 16380-17492 bp Feature: domain Description: beta_clamp Location: 16383-17487 bp Feature: domain Description: beta_clamp Location: 16383-17487 bp Feature: gene Location: 17573-18100 bp Feature: gene Location: 18178-20079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18496-19198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18496-19198 bp Feature: gene Location: 20274-20414 bp Feature: gene Location: 20838-21194 bp Feature: domain Description: COG4712 Location: 20847-21189 bp Feature: domain Description: COG4712 Location: 2 0847-2 1189 bp Feature: gene Location: 67014-68744 bp Feature: domain Description: LPD1 Location: 68493-68688 bp Feature: domain Description: LPD1 Location: 68493-68688 bp Feature: gene Location: 68734-69264 bp Feature: gene Location: 70000-71883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70321-71059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7032 1-71059 bp Feature: domain Description: HNHc Note: nucleases Location: 71617-71764 bp Feature: domain Description: HNHc Note: nucleases Location: 71617-71764 bp Feature: gene Location: 71967-72890 bp Feature: domain Description: DUF3854 Location: 72507-72861 bp Feature: domain Description: DUF3854 Location: 72 507-72 861 bp Feature: gene Location: 73047-73208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), E1_enzyme_family (cl22428), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), LPD1 (pfam18796), DUF3854 (pfam12965)