myRT

myRT report for GCA_009429045.2_ASM942904v2

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Seq: CP045538.2 Proteus mirabilis strain CRE14IB chromosome, complete genome (4018329 bp)
Overview 1 RT 1: 1657441-1661832 bp 2 RT 2: 3412289-3418099 bp Neighborhood of RT #1 [1657441, 1661832] TIGR02646 COG3950 RVT-Retrons PRK07006 Neighborhood of RT #2 [3412289, 3418104] RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 1657441-1658070 bp Ori: QFV08606.1 Feature: domain Description: TIGR02646 Location: 1657531-1657906 bp Feature: domain Description: TIGR02646 Location: 1 657531 -1 657906 bp Feature: gene Location: 1658067-1659656 bp Ori: QFV08607.1 Feature: domain Description: COG3950 Location: 1658247-1659483 bp Feature: domain Description: COG3950 Location: 1 658247-1 659483 bp Feature: gene Location: 1659637-1660599 bp Ori: QFV08608.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1659745-1660342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 659745-1 660342 bp Feature: gene Location: 1661093-1661257 bp Ori: QFV08609.1 Feature: domain Description: PRK07006 Location: 1661096-1661255 bp Feature: domain Description: PRK07006 Location: 1 661 096-1 661 255 bp Feature: gene Location: 1661377-1661832 bp Feature: gene Location: 3412289-3412762 bp Feature: gene Location: 3412994-3413245 bp Feature: gene Location: 3413336-3415000 bp Ori: QFV06706.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3413387-3413630 bp Feature: domain Description: RVT_N Location: 341 3387-341 3630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3413675-3414320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 3675-341 4320 bp Feature: domain Description: GIIM Note: maturase Location: 3414374-3414605 bp Feature: domain Description: GIIM Note: maturase Location: 341 4374-341 4605 bp Feature: domain Description: HNHc Note: nucleases Location: 3414818-3414977 bp Feature: domain Description: HNHc Note: nucleases Location: 341 481 8-341 4977 bp Feature: gene Location: 3416112-3417758 bp Ori: QFV06707.1 Gene: groL Feature: domain Description: groEL Location: 3416118-3417741 bp Feature: domain Description: groEL Location: 341 61 1 8-341 7741 bp Feature: gene Location: 3417811-3418104 bp Ori: QFV06708.1 Gene: groES Feature: domain Description: groES Location: 3417814-3418099 bp Feature: domain Description: groES Location: 341 781 4-341 8099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK07006 (isocitrate dehydrogenase; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)