myRT

myRT report for GCA_009495655.1_ASM949565v1

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Seq: CP045547.1 Streptomyces sp. SYP-A7193 chromosome, complete genome (8193527 bp)
Overview 1 RT 1: 4781470-4786772 bp Neighborhood of RT #1 [4781470, 4786772] HTH_31 KOG4410 RVT-UG23 Sa_NUDIX Feature: gene Location: 4781470-4782636 bp Ori: QFX83160.1 Feature: domain Description: HTH_31 Location: 4781494-4781659 bp Feature: domain Description: HTH_31 Location: 4781 494-4781 659 bp Feature: gene Location: 4782656-4783381 bp Ori: QFX83161.1 Feature: domain Description: KOG4410 Location: 4782674-4783361 bp Feature: domain Description: KOG441 0 Location: 4782674-4783361 bp Feature: gene Location: 4783689-4785158 bp Ori: QFX83162.1 Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 4783878-4784466 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 4783878-4784466 bp Feature: gene Location: 4785277-4785963 bp Ori: QFX83163.1 Feature: domain Description: Sa_NUDIX Location: 4785373-4785961 bp Feature: domain Description: Sa_NUDIX Location: 4785373-4785961 bp Feature: gene Location: 4786590-4786772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), KOG4410 (KOG4410, 5-formyltetrahydrofolate cyclo-ligase ), RVT-UG23, Sa_NUDIX (pfam18167)

Seq: CP045548.1 Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence (508575 bp)
Overview 1 RT 1: 312918-317918 bp Neighborhood of RT #1 [312918, 318048] GATase1_PfpI_2 DDE_Tnp_1_2 RVT_N RVT-GII GIIM HNH DUF4096 DUF4096 Feature: gene Location: 312918-313601 bp Ori: QFX86759.1 Feature: domain Description: GATase1_PfpI_2 Location: 313002-313569 bp Feature: domain Description: GATase1_PfpI_2 Location: 313002 -313569 bp Feature: gene Location: 314234-314341 bp Ori: QFX86760.1 Feature: domain Description: DDE_Tnp_1_2 Location: 314255-314336 bp Feature: domain Description: DDE_Tnp_1_2 Location: 3142 55-314336 bp Feature: gene Location: 314429-316186 bp Ori: QFX86761.1 Gene: ltrA Feature: domain Description: RVT_N Location: 314501-314738 bp Feature: domain Description: RVT_N Location: 314501-314738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314798-315455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314798-315455 bp Feature: domain Description: GIIM Note: maturase Location: 315506-315740 bp Feature: domain Description: GIIM Note: maturase Location: 315506-315740 bp Feature: domain Description: HNH Note: nucleases Location: 316064-316169 bp Feature: domain Description: HNH Note: nucleases Location: 316064-316169 bp Feature: gene Location: 316774-317603 bp Feature: domain Description: DUF4096 Location: 316810-317020 bp Feature: domain Description: DUF4096 Location: 316810-31702 0 bp Feature: gene Location: 317687-318048 bp Ori: QFX86762.1 Feature: domain Description: DUF4096 Location: 317705-317918 bp Feature: domain Description: DUF4096 Location: 317705-317918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase1_PfpI_2 (cd03139), DDE_Tnp_1_2 (pfam13586), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF4096 (pfam13340)