myRT

myRT report for GCA_009497075.1_ASM949707v1

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Seq: CP045572.1 Nonomuraea sp. WYY166 chromosome, complete genome (11273186 bp)
Overview 1 RT 1: 5236127-5240157 bp 2 RT 2: 5261210-5267419 bp 3 RT 3: 6266535-6270784 bp Neighborhood of RT #1 [5236127, 5240168] CitB MFS_MefA_like RVT-GII GIIM AcrR Neighborhood of RT #2 [5261210, 5267424] HTH_32 rve RVT-GII RVT-GII GIIM GIIM Glyoxalase_6 Neighborhood of RT #3 [6266535, 6270819] RVT-GII GIIM COG4188 Acetyltransf_1 Feature: gene Location: 5236127-5236453 bp Ori: QFY14451.1 Feature: domain Description: CitB Location: 5236184-5236436 bp Feature: domain Description: CitB Location: 52361 84-5236436 bp Feature: gene Location: 5236785-5238089 bp Ori: QFY09304.1 Feature: domain Description: MFS_MefA_like Location: 5236872-5238018 bp Feature: domain Description: MFS_MefA_like Location: 5236872-523801 8 bp Feature: gene Location: 5238554-5238964 bp Ori: QFY09305.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5238557-5238620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5238557-5238620 bp Feature: domain Description: GIIM Note: maturase Location: 5238692-5238923 bp Feature: domain Description: GIIM Note: maturase Location: 5238692-5238923 bp Feature: gene Location: 5239021-5239578 bp Feature: gene Location: 5239575-5240168 bp Ori: QFY09307.1 Feature: domain Description: AcrR Location: 5239578-5240157 bp Feature: domain Description: AcrR Location: 5239578-52401 57 bp Feature: gene Location: 5261210-5262403 bp Ori: QFY09320.1 Feature: domain Description: HTH_32 Location: 5261303-5261537 bp Feature: domain Description: HTH_32 Location: 5261 303-5261 537 bp Feature: domain Description: rve Location: 5261615-5261975 bp Feature: domain Description: rve Location: 5261 61 5-5261 975 bp Feature: gene Location: 5262616-5262864 bp Feature: gene Location: 5263624-5264475 bp Ori: QFY09322.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263840-5264437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263840-5264437 bp Feature: gene Location: 5265045-5266292 bp Ori: QFY14455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5265243-5265900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5265243-5265900 bp Feature: domain Description: GIIM Note: maturase Location: 5265999-5266200 bp Feature: domain Description: GIIM Note: maturase Location: 5265999-5266200 bp Feature: gene Location: 5266186-5266809 bp Ori: QFY09323.1 Feature: domain Description: GIIM Note: maturase Location: 5266516-5266741 bp Feature: domain Description: GIIM Note: maturase Location: 526651 6-5266741 bp Feature: gene Location: 5266990-5267424 bp Ori: QFY09324.1 Feature: domain Description: Glyoxalase_6 Location: 5267014-5267419 bp Feature: domain Description: Glyoxalase_6 Location: 526701 4-526741 9 bp Feature: gene Location: 6266535-6267956 bp Feature: gene Location: 6267969-6268589 bp Feature: gene Location: 6268904-6269434 bp Ori: QFY14558.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6269057-6269198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6269057-62691 98 bp Feature: domain Description: GIIM Note: maturase Location: 6269267-6269372 bp Feature: domain Description: GIIM Note: maturase Location: 6269267-6269372 bp Feature: gene Location: 6269389-6270106 bp Feature: domain Description: COG4188 Location: 6269401-6269689 bp Feature: domain Description: COG41 88 Location: 6269401 -6269689 bp Feature: gene Location: 6270352-6270819 bp Ori: QFY10175.1 Feature: domain Description: Acetyltransf_1 Location: 6270487-6270784 bp Feature: domain Description: Acetyltransf_1 Location: 6270487-6270784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitB (TIGR02484), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388), AcrR (COG1309), HTH_32 (pfam13565), rve (pfam00665), Glyoxalase_6 (pfam18029), COG4188 (Predicted dienelactone hydrolase ), Acetyltransf_1 (pfam00583)