myRT

myRT report for GCA_009497715.1_ASM949771v1

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Seq: CP026013.1 Klebsiella variicola strain 13450 chromosome, complete genome (5511705 bp)
Overview 1 RT 1: 78340-83297 bp 2 RT 2: 1866073-1872370 bp Neighborhood of RT #1 [78340, 83302] SymE_toxin HicB RVT-Retrons COG3432 PRK11462 Neighborhood of RT #2 [1866073, 1872888] MazE PRK09812 RVT-Retrons AAA_15 AAA_23 PRK03918 Feature: gene Location: 78340-78626 bp Feature: domain Description: SymE_toxin Location: 78388-78532 bp Feature: domain Description: SymE_toxin Location: 78388-78532 bp Feature: gene Location: 78762-78944 bp Ori: QFY20373.1 Feature: domain Description: HicB Location: 78816-78897 bp Feature: domain Description: HicB Location: 7881 6-78897 bp Feature: gene Location: 78930-79946 bp Ori: QFY20374.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79140-79689 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 791 40-79689 bp Feature: gene Location: 80210-80557 bp Ori: QFY20375.1 Feature: domain Description: COG3432 Location: 80246-80426 bp Feature: domain Description: COG3432 Location: 80246-80426 bp Feature: gene Location: 81908-83302 bp Ori: QFY20376.1 Feature: domain Description: PRK11462 Location: 81911-83297 bp Feature: domain Description: PRK1 1 462 Location: 81 91 1 -83297 bp Feature: gene Location: 1866073-1866330 bp Ori: QFY22013.1 Feature: domain Description: MazE Location: 1866085-1866328 bp Feature: domain Description: MazE Location: 1 866085-1 866328 bp Feature: gene Location: 1866331-1866663 bp Ori: QFY22014.1 Feature: domain Description: PRK09812 Location: 1866337-1866658 bp Feature: domain Description: PRK0981 2 Location: 1 866337-1 866658 bp Feature: gene Location: 1866994-1868094 bp Ori: QFY22015.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1867177-1867705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8671 77-1 867705 bp Feature: gene Location: 1868209-1870455 bp Ori: QFY22016.1 Feature: domain Description: AAA_15 Location: 1868212-1869220 bp Feature: domain Description: AAA_1 5 Location: 1 86821 2-1 869220 bp Feature: gene Location: 1871008-1872888 bp Ori: QFY22017.1 Feature: domain Description: AAA_23 Location: 1871077-1871785 bp Feature: domain Description: AAA_23 Location: 1 871 077-1 871 785 bp Feature: domain Description: PRK03918 Location: 1872094-1872370 bp Feature: domain Description: PRK0391 8 Location: 1 872094-1 872370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SymE_toxin (pfam08845), HicB (pfam05534), RVT-Retrons, COG3432 (Predicted transcriptional regulator ), PRK11462 (putative transporter; Provisional), MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin), AAA_15 (pfam13175), AAA_23 (pfam13476), PRK03918 (DNA double-strand break repair ATPase Rad50)

Seq: CP026014.1 Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence (344479 bp)
Overview 1 RT 1: 249792-254988 bp Neighborhood of RT #1 [249792, 254990] PRK15417 IMP_DIM-like_MBL-B1 RVT-GII GIIM Multi_Drug_Res PRK13753 Feature: gene Location: 249792-250805 bp Ori: QFY25743.1 Feature: domain Description: PRK15417 Location: 249795-250803 bp Feature: domain Description: PRK15417 Location: 2 49795-2 50803 bp Feature: gene Location: 250958-251698 bp Ori: QFY25744.1 Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 251030-251651 bp Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 2 51030-2 51651 bp Feature: gene Location: 251788-253137 bp Ori: QFY25745.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252070-252688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 52 070-2 52 688 bp Feature: domain Description: GIIM Note: maturase Location: 252736-252940 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 736-2 52 940 bp Feature: gene Location: 253810-254157 bp Ori: QFY25746.1 Gene: qacE Feature: domain Description: Multi_Drug_Res Location: 253819-254092 bp Feature: domain Description: Multi_Drug_Res Location: 2 53819-2 54092 bp Feature: gene Location: 254151-254990 bp Ori: QFY25747.1 Feature: domain Description: PRK13753 Location: 254154-254988 bp Feature: domain Description: PRK13753 Location: 2 54154-2 54988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), IMP_DIM-like_MBL-B1 (cd16301), RVT-GII, GIIM (pfam08388), Multi_Drug_Res (pfam00893), PRK13753 (dihydropteroate synthase; Provisional)