myRT

myRT report for GCA_009497875.1_ASM949787v1

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Seq: CP032508.1 Gamma proteobacterium SS-5 chromosome, complete genome (3729439 bp)
Overview 1 RT 1: 1156871-1160399 bp 2 RT 2: 1162843-1167036 bp Neighborhood of RT #1 [1156871, 1160482] Zn_Tnp_IS1595 DDE_Tnp_IS1595 HicB RVT-GII HicA_toxin HicB PIN_3 Neighborhood of RT #2 [1162843, 1167047] TPR TPR TPR RVT-GII GIIM T_den_put_tspse T_den_put_tspse HEPN Feature: gene Location: 1156871-1157818 bp Ori: QFY88949.1 Feature: domain Description: Zn_Tnp_IS1595 Location: 1156937-1157072 bp Feature: domain Description: Zn_Tnp_IS1 595 Location: 1 1 56937-1 1 57072 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 1157279-1157714 bp Feature: domain Description: DDE_Tnp_IS1 595 Location: 1 1 57279-1 1 5771 4 bp Feature: gene Location: 1157893-1158234 bp Ori: QFY88950.1 Feature: domain Description: HicB Location: 1157899-1158226 bp Feature: domain Description: HicB Location: 1 1 57899-1 1 58226 bp Feature: gene Location: 1158231-1159121 bp Ori: QFY91063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158435-1158951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 58435-1 1 58951 bp Feature: domain Description: HicA_toxin Location: 1158957-1159092 bp Feature: domain Description: HicA_toxin Location: 1 1 58957-1 1 59092 bp Feature: gene Location: 1159827-1160060 bp Ori: QFY88951.1 Feature: domain Description: HicB Location: 1159839-1159926 bp Feature: domain Description: HicB Location: 1 1 59839-1 1 59926 bp Feature: gene Location: 1160057-1160482 bp Ori: QFY88952.1 Feature: domain Description: PIN_3 Location: 1160066-1160399 bp Feature: domain Description: PIN_3 Location: 1 1 60066-1 1 60399 bp Feature: gene Location: 1162843-1163100 bp Ori: QFY91064.1 Feature: domain Description: TPR Location: 1162852-1163098 bp Feature: domain Description: TPR Location: 1 1 62852-1 1 63098 bp Feature: gene Location: 1162938-1163678 bp Ori: QFY88955.1 Feature: domain Description: TPR Location: 1162956-1163211 bp Feature: domain Description: TPR Location: 1 1 62956-1 1 6321 1 bp Feature: domain Description: TPR Location: 1163310-1163487 bp Feature: domain Description: TPR Location: 1 1 6331 0-1 1 63487 bp Feature: gene Location: 1163872-1165302 bp Ori: QFY91065.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164241-1164931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 64241 -1 1 64931 bp Feature: domain Description: GIIM Note: maturase Location: 1165006-1165231 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 65006-1 1 65231 bp Feature: gene Location: 1165820-1166629 bp Ori: QFY88956.1 Feature: domain Description: T_den_put_tspse Location: 1165931-1166069 bp Feature: domain Description: T_den_put_tspse Location: 1 1 65931 -1 1 66069 bp Feature: domain Description: T_den_put_tspse Location: 1166462-1166606 bp Feature: domain Description: T_den_put_tspse Location: 1 1 66462-1 1 66606 bp Feature: gene Location: 1166763-1167047 bp Ori: QFY88957.1 Feature: domain Description: HEPN Location: 1166919-1167036 bp Feature: domain Description: HEPN Location: 1 1 6691 9-1 1 67036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1595 (pfam12760), DDE_Tnp_IS1595 (pfam12762), HicB (pfam05534), RVT-GII, HicA_toxin (pfam07927), PIN_3 (pfam13470), TPR (smart00028), GIIM (pfam08388), T_den_put_tspse (TIGR01784), HEPN (smart00748)