myRT

myRT report for GCA_009498015.1_ASM949801v1

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Seq: CP034058.1 Anabaena sp. YBS01 chromosome, complete genome (7013200 bp)
Overview 1 RT 1: 3939156-3950163 bp 2 RT 2: 6955805-6961894 bp Neighborhood of RT #1 [3939156, 3950163] sporadsporadsporadTIGR04255 AlbA_2 TPR TPR RVT-Retrons YprA YprA YprA Neighborhood of RT #2 [6955805, 6961953] SDR_a5 type_I_hlyD type_I_hlyD RVT_N RVT-GII GIIM McrA INT_tnpA_C_Tn554 Feature: gene Location: 3939156-3939917 bp Ori: QFZ13509.1 Feature: domain Description: sporadsporadsporadTIGR04255 Location: 3939171-3939897 bp Feature: domain Description: sporadsporadsporadTIGR04255 Location: 39391 71 -3939897 bp Feature: gene Location: 3940552-3941616 bp Ori: QFZ13510.1 Feature: domain Description: AlbA_2 Location: 3940603-3941032 bp Feature: domain Description: AlbA_2 Location: 3940603-3941 032 bp Feature: domain Description: TPR Location: 3941143-3941413 bp Feature: domain Description: TPR Location: 3941 1 43-3941 41 3 bp Feature: domain Description: TPR Location: 3941467-3941548 bp Feature: domain Description: TPR Location: 3941 467-3941 548 bp Feature: gene Location: 3941847-3942941 bp Ori: QFZ13511.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3942030-3942633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3942030-3942633 bp Feature: gene Location: 3942959-3949252 bp Ori: QFZ13512.1 Feature: domain Description: YprA Location: 3943052-3944063 bp Feature: domain Description: YprA Location: 3943052-3944063 bp Feature: domain Description: YprA Location: 3946154-3946589 bp Feature: domain Description: YprA Location: 39461 54-3946589 bp Feature: domain Description: YprA Location: 3947927-3948224 bp Feature: domain Description: YprA Location: 3947927-3948224 bp Feature: gene Location: 3949237-3950163 bp Feature: gene Location: 6955805-6956680 bp Ori: QFZ15674.1 Feature: domain Description: SDR_a5 Location: 6955811-6956408 bp Feature: domain Description: SDR_a5 Location: 695581 1 -6956408 bp Feature: gene Location: 6956778-6958274 bp Ori: QFZ15675.1 Feature: domain Description: type_I_hlyD Location: 6956904-6957591 bp Feature: domain Description: type_I_hlyD Location: 6956904-6957591 bp Feature: domain Description: type_I_hlyD Location: 6957591-6958263 bp Feature: domain Description: type_I_hlyD Location: 6957591 -6958263 bp Feature: gene Location: 6958962-6960728 bp Ori: QFZ16056.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6959019-6959265 bp Feature: domain Description: RVT_N Location: 695901 9-6959265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6959307-6959985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6959307-6959985 bp Feature: domain Description: GIIM Note: maturase Location: 6960087-6960318 bp Feature: domain Description: GIIM Note: maturase Location: 6960087-696031 8 bp Feature: domain Description: McrA Location: 6960402-6960669 bp Feature: domain Description: McrA Location: 6960402-6960669 bp Feature: gene Location: 6960930-6961451 bp Feature: gene Location: 6961744-6961953 bp Ori: QFZ16057.1 Feature: domain Description: INT_tnpA_C_Tn554 Location: 6961777-6961894 bp Feature: domain Description: INT_tnpA_C_Tn554 Location: 6961 777-6961 894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sporadsporadsporadTIGR04255, AlbA_2 (pfam04326), TPR (smart00028), RVT-Retrons, YprA (COG1205), SDR_a5 (cd05243), type_I_hlyD (TIGR01843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
McrA (COG4058), INT_tnpA_C_Tn554 (cd01186)