myRT

myRT report for GCA_009498295.1_ASM949829v1

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Seq: CP040813.1 Oceanihabitans sp. IOP_32 chromosome, complete genome (3475698 bp)
Overview 1 RT 1: 1232416-1237744 bp 2 RT 2: 2936833-2942067 bp Neighborhood of RT #1 [1232416, 1237749] Zn_Tnp_IS91 Y2_Tnp Y2_Tnp RVT-GII GIIM Acetyltransf_1 Nth Neighborhood of RT #2 [2936833, 2942067] INT_IntI_C HTH_3 RVT-Retrons Feature: gene Location: 1232416-1233537 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1232476-1232710 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1 232476-1 23271 0 bp Feature: domain Description: Y2_Tnp Location: 1232836-1233094 bp Feature: domain Description: Y2_Tnp Location: 1 232836-1 233094 bp Feature: domain Description: Y2_Tnp Location: 1233196-1233340 bp Feature: domain Description: Y2_Tnp Location: 1 2331 96-1 233340 bp Feature: gene Location: 1233839-1234432 bp Feature: gene Location: 1234660-1235907 bp Ori: QFZ54227.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1234873-1235527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 234873-1 235527 bp Feature: domain Description: GIIM Note: maturase Location: 1235611-1235830 bp Feature: domain Description: GIIM Note: maturase Location: 1 23561 1 -1 235830 bp Feature: gene Location: 1236556-1237083 bp Ori: QFZ54228.1 Feature: domain Description: Acetyltransf_1 Location: 1236679-1236991 bp Feature: domain Description: Acetyltransf_1 Location: 1 236679-1 236991 bp Feature: gene Location: 1237096-1237749 bp Ori: QFZ54229.1 Feature: domain Description: Nth Location: 1237105-1237744 bp Feature: domain Description: Nth Location: 1 2371 05-1 237744 bp Feature: gene Location: 2936833-2937585 bp Feature: domain Description: INT_IntI_C Location: 2937031-2937529 bp Feature: domain Description: INT_IntI_C Location: 2937031 -2937529 bp Feature: gene Location: 2938657-2938947 bp Ori: QFZ55529.1 Feature: domain Description: HTH_3 Location: 2938678-2938834 bp Feature: domain Description: HTH_3 Location: 2938678-2938834 bp Feature: gene Location: 2938928-2939791 bp Ori: QFZ55530.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2939105-2939627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29391 05-2939627 bp Feature: gene Location: 2940155-2940385 bp Feature: gene Location: 2940391-2942067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388), Acetyltransf_1 (pfam00583), Nth (COG0177), INT_IntI_C (cd01193), HTH_3 (pfam01381), RVT-Retrons